EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0060414	KH_1	PF00013.29	9e-17	1	2
MGP_BALBcJ_P0060414	KH_1	PF00013.29	9e-17	2	2
MGP_BALBcJ_P0060412	KH_1	PF00013.29	9.2e-17	1	2
MGP_BALBcJ_P0060412	KH_1	PF00013.29	9.2e-17	2	2
MGP_BALBcJ_P0060411	KH_1	PF00013.29	1.1e-16	1	2
MGP_BALBcJ_P0060411	KH_1	PF00013.29	1.1e-16	2	2
MGP_BALBcJ_P0060413	KH_1	PF00013.29	1.3e-16	1	2
MGP_BALBcJ_P0060413	KH_1	PF00013.29	1.3e-16	2	2
MGP_BALBcJ_P0060409	KH_1	PF00013.29	1.7e-16	1	2
MGP_BALBcJ_P0060409	KH_1	PF00013.29	1.7e-16	2	2
MGP_BALBcJ_P0060414	Agenet	PF05641.12	4.1e-15	1	2
MGP_BALBcJ_P0060414	Agenet	PF05641.12	4.1e-15	2	2
MGP_BALBcJ_P0060412	Agenet	PF05641.12	4.2e-15	1	2
MGP_BALBcJ_P0060412	Agenet	PF05641.12	4.2e-15	2	2
MGP_BALBcJ_P0060411	Agenet	PF05641.12	4.9e-15	1	2
MGP_BALBcJ_P0060411	Agenet	PF05641.12	4.9e-15	2	2
MGP_BALBcJ_P0060413	Agenet	PF05641.12	6.4e-15	1	2
MGP_BALBcJ_P0060413	Agenet	PF05641.12	6.4e-15	2	2
MGP_BALBcJ_P0060409	Agenet	PF05641.12	8e-15	1	2
MGP_BALBcJ_P0060409	Agenet	PF05641.12	8e-15	2	2
MGP_BALBcJ_P0060411	FXMRP1_C_core	PF12235.8	3.1e-46	1	1
MGP_BALBcJ_P0060409	FXMRP1_C_core	PF12235.8	4.1e-46	1	1
MGP_BALBcJ_P0060414	FXMRP1_C_core	PF12235.8	8.5e-29	1	2
MGP_BALBcJ_P0060414	FXMRP1_C_core	PF12235.8	8.5e-29	2	2
MGP_BALBcJ_P0060412	FXMRP1_C_core	PF12235.8	8.7e-29	1	2
MGP_BALBcJ_P0060412	FXMRP1_C_core	PF12235.8	8.7e-29	2	2
MGP_BALBcJ_P0060413	FXMRP1_C_core	PF12235.8	5.3e-28	1	2
MGP_BALBcJ_P0060413	FXMRP1_C_core	PF12235.8	5.3e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0060416	-	646	-	MGP_BALBcJ_P0060416	132 (aa)	-	-
MGP_BALBcJ_T0060412	-	3013	-	MGP_BALBcJ_P0060412	539 (aa)	-	-
MGP_BALBcJ_T0060413	-	2128	-	MGP_BALBcJ_P0060413	621 (aa)	-	-
MGP_BALBcJ_T0060410	-	2157	-	MGP_BALBcJ_P0060410	54 (aa)	-	-
MGP_BALBcJ_T0060411	-	2126	-	MGP_BALBcJ_P0060411	568 (aa)	-	-
MGP_BALBcJ_T0060409	-	2497	XM_006535400	MGP_BALBcJ_P0060409	677 (aa)	XP_006535463	Q61584
MGP_BALBcJ_T0060417	-	2484	-	-	- (aa)	-	-
MGP_BALBcJ_T0060414	-	1611	-	MGP_BALBcJ_P0060414	536 (aa)	-	-
MGP_BALBcJ_T0060415	-	651	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0027120	Fxr1	99	66.490	MGP_BALBcJ_G0018482	Fxr2	98	62.737
MGP_BALBcJ_G0027120	Fxr1	81	73.653	MGP_BALBcJ_G0035742	Fmr1	85	65.613