EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0027302 (Gene tree)
Gene ID: -
Gene Symbol: Rbm46
Alias: EG633285|ENSMUSG00000033882|Gm761|LOC329687
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 41126 bases
Position: chr3:80020690-80061815
Accession: 3645057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0061280	DND1_DSRM	PF14709.7	1.9e-27	1	1
MGP_BALBcJ_P0061281	DND1_DSRM	PF14709.7	2.1e-27	1	1
MGP_BALBcJ_P0061279	DND1_DSRM	PF14709.7	2.6e-27	1	1
MGP_BALBcJ_P0061280	RRM_1	PF00076.22	8.9e-37	1	3
MGP_BALBcJ_P0061280	RRM_1	PF00076.22	8.9e-37	2	3
MGP_BALBcJ_P0061280	RRM_1	PF00076.22	8.9e-37	3	3
MGP_BALBcJ_P0061281	RRM_1	PF00076.22	1e-36	1	3
MGP_BALBcJ_P0061281	RRM_1	PF00076.22	1e-36	2	3
MGP_BALBcJ_P0061281	RRM_1	PF00076.22	1e-36	3	3
MGP_BALBcJ_P0061279	RRM_1	PF00076.22	1.5e-36	1	3
MGP_BALBcJ_P0061279	RRM_1	PF00076.22	1.5e-36	2	3
MGP_BALBcJ_P0061279	RRM_1	PF00076.22	1.5e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0061280	-	2058	-	MGP_BALBcJ_P0061280	470 (aa)	-	-
MGP_BALBcJ_T0061279	-	1794	XM_006501849	MGP_BALBcJ_P0061279	533 (aa)	XP_006501912	P86049
MGP_BALBcJ_T0061281	-	2115	-	MGP_BALBcJ_P0061281	485 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0027302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0027302's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0027302	Rbm46	65	56.774	MGP_BALBcJ_G0028948	-	59	56.329
MGP_BALBcJ_G0027302	Rbm46	52	30.000	MGP_BALBcJ_G0033066	Tial1	73	32.000
MGP_BALBcJ_G0027302	Rbm46	63	55.000	MGP_BALBcJ_G0035078	Syncrip	53	54.333
MGP_BALBcJ_G0027302	Rbm46	88	70.064	MGP_BALBcJ_G0025013	A1cf	96	70.064
MGP_BALBcJ_G0027302	Rbm46	66	72.468	MGP_BALBcJ_G0029564	Rbm47	94	73.649