EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0027523 (Gene tree)
Gene ID: -
Gene Symbol: Celf3
Alias: 4930415M08Rik|BRUNOL1|CAGH4|ERDA4|Tnrc4
Full Name: CUGBP%2C Elav-like family member 3
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 13894 bases
Position: chr3:91875702-91889595
Accession: 1926034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0062175	RRM_1	PF00076.22	9.3e-54	1	3
MGP_BALBcJ_P0062175	RRM_1	PF00076.22	9.3e-54	2	3
MGP_BALBcJ_P0062175	RRM_1	PF00076.22	9.3e-54	3	3
MGP_BALBcJ_P0062174	RRM_1	PF00076.22	1.5e-53	1	3
MGP_BALBcJ_P0062174	RRM_1	PF00076.22	1.5e-53	2	3
MGP_BALBcJ_P0062174	RRM_1	PF00076.22	1.5e-53	3	3
MGP_BALBcJ_P0062176	RRM_1	PF00076.22	2e-53	1	3
MGP_BALBcJ_P0062176	RRM_1	PF00076.22	2e-53	2	3
MGP_BALBcJ_P0062176	RRM_1	PF00076.22	2e-53	3	3
MGP_BALBcJ_P0062181	RRM_1	PF00076.22	6.9e-16	1	1
MGP_BALBcJ_P0062182	RRM_1	PF00076.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0062185	-	855	-	-	- (aa)	-	-
MGP_BALBcJ_T0062184	-	889	-	-	- (aa)	-	-
MGP_BALBcJ_T0062173	-	365	XM_006502323	MGP_BALBcJ_P0062173	31 (aa)	XP_006502386	Q8CIN6
MGP_BALBcJ_T0062177	-	1193	-	-	- (aa)	-	-
MGP_BALBcJ_T0062176	-	4103	-	MGP_BALBcJ_P0062176	494 (aa)	-	-
MGP_BALBcJ_T0062175	-	2356	-	MGP_BALBcJ_P0062175	416 (aa)	-	-
MGP_BALBcJ_T0062174	-	2749	-	MGP_BALBcJ_P0062174	465 (aa)	-	-
MGP_BALBcJ_T0062179	-	2446	-	-	- (aa)	-	-
MGP_BALBcJ_T0062178	-	669	-	-	- (aa)	-	-
MGP_BALBcJ_T0062182	-	726	-	MGP_BALBcJ_P0062182	231 (aa)	-	-
MGP_BALBcJ_T0062183	-	3382	-	-	- (aa)	-	-
MGP_BALBcJ_T0062180	-	2937	-	-	- (aa)	-	-
MGP_BALBcJ_T0062181	-	779	-	MGP_BALBcJ_P0062181	182 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0027523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0027523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0027523	Celf3	90	55.801	MGP_BALBcJ_G0025305	Celf2	94	83.333
MGP_BALBcJ_G0027523	Celf3	80	37.500	MGP_BALBcJ_G0023107	Pabpc6	72	36.585
MGP_BALBcJ_G0027523	Celf3	67	32.857	MGP_BALBcJ_G0026809	Pabpc1l	57	34.118
MGP_BALBcJ_G0027523	Celf3	100	67.213	MGP_BALBcJ_G0017500	Celf5	89	63.920
MGP_BALBcJ_G0027523	Celf3	70	34.091	MGP_BALBcJ_G0033066	Tial1	81	37.333
MGP_BALBcJ_G0027523	Celf3	98	35.632	MGP_BALBcJ_G0033314	Elavl1	95	44.444
MGP_BALBcJ_G0027523	Celf3	100	69.072	MGP_BALBcJ_G0024174	Celf4	100	63.275
MGP_BALBcJ_G0027523	Celf3	91	39.474	MGP_BALBcJ_G0035377	Rbms3	76	39.474
MGP_BALBcJ_G0027523	Celf3	77	37.805	MGP_BALBcJ_G0030954	Tia1	93	38.667
MGP_BALBcJ_G0027523	Celf3	98	35.632	MGP_BALBcJ_G0034443	Elavl3	89	34.940
MGP_BALBcJ_G0027523	Celf3	99	43.830	MGP_BALBcJ_G0026107	Celf1	97	43.320
MGP_BALBcJ_G0027523	Celf3	63	41.975	MGP_BALBcJ_G0028426	Elavl2	76	41.975
MGP_BALBcJ_G0027523	Celf3	81	87.368	MGP_BALBcJ_G0034875	Celf6	75	85.526
MGP_BALBcJ_G0027523	Celf3	61	40.741	MGP_BALBcJ_G0028558	Elavl4	85	40.741