EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0027796 (Gene tree)
Gene ID: -
Gene Symbol: Ptbp2
Alias: Brptb|Nptb|Ptb2|brPTB|nPTB
Full Name: polypyrimidine tract binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 66584 bases
Position: chr3:117623956-117690539
Accession: 1860489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0063403	RRM_5	PF13893.6	3.4e-53	1	3
MGP_BALBcJ_P0063403	RRM_5	PF13893.6	3.4e-53	2	3
MGP_BALBcJ_P0063403	RRM_5	PF13893.6	3.4e-53	3	3
MGP_BALBcJ_P0063402	RRM_5	PF13893.6	4e-52	1	2
MGP_BALBcJ_P0063402	RRM_5	PF13893.6	4e-52	2	2
MGP_BALBcJ_P0063408	RRM_5	PF13893.6	3.4e-20	1	1
MGP_BALBcJ_P0063402	RRM_1	PF00076.22	5.9e-33	1	3
MGP_BALBcJ_P0063402	RRM_1	PF00076.22	5.9e-33	2	3
MGP_BALBcJ_P0063402	RRM_1	PF00076.22	5.9e-33	3	3
MGP_BALBcJ_P0063403	RRM_1	PF00076.22	2e-32	1	3
MGP_BALBcJ_P0063403	RRM_1	PF00076.22	2e-32	2	3
MGP_BALBcJ_P0063403	RRM_1	PF00076.22	2e-32	3	3
MGP_BALBcJ_P0063410	RRM_1	PF00076.22	2.5e-10	1	1
MGP_BALBcJ_P0063408	RRM_1	PF00076.22	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0063410	-	1742	-	MGP_BALBcJ_P0063410	241 (aa)	-	-
MGP_BALBcJ_T0063414	-	389	-	MGP_BALBcJ_P0063414	49 (aa)	-	-
MGP_BALBcJ_T0063411	-	654	-	-	- (aa)	-	-
MGP_BALBcJ_T0063413	-	454	-	-	- (aa)	-	-
MGP_BALBcJ_T0063412	-	478	-	-	- (aa)	-	-
MGP_BALBcJ_T0063402	-	3774	XM_006501731	MGP_BALBcJ_P0063402	531 (aa)	XP_006501794	Q91Z31
MGP_BALBcJ_T0063403	-	3365	-	MGP_BALBcJ_P0063403	532 (aa)	-	-
MGP_BALBcJ_T0063404	-	1598	-	MGP_BALBcJ_P0063404	356 (aa)	-	-
MGP_BALBcJ_T0063405	-	576	-	MGP_BALBcJ_P0063405	33 (aa)	-	-
MGP_BALBcJ_T0063406	-	937	-	-	- (aa)	-	-
MGP_BALBcJ_T0063407	-	491	-	-	- (aa)	-	-
MGP_BALBcJ_T0063408	-	465	-	MGP_BALBcJ_P0063408	155 (aa)	-	-
MGP_BALBcJ_T0063409	-	4047	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0027796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0027796's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0027796	Ptbp2	100	72.903	MGP_BALBcJ_G0017403	Ptbp1	100	73.048
MGP_BALBcJ_G0027796	Ptbp2	99	69.835	MGP_BALBcJ_G0028316	Ptbp3	91	78.195
MGP_BALBcJ_G0027796	Ptbp2	77	30.645	MGP_BALBcJ_G0031947	Hnrnpl	77	30.645
MGP_BALBcJ_G0027796	Ptbp2	99	30.357	MGP_BALBcJ_G0024014	Hnrnpll	57	30.000