EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0027959 (Gene tree)
Gene ID: -
Gene Symbol: Fubp1
Alias: 9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 26415 bases
Position: chr3:150240748-150267162
Accession: 1196294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0064271	KH_1	PF00013.29	7.2e-70	1	4
MGP_BALBcJ_P0064271	KH_1	PF00013.29	7.2e-70	2	4
MGP_BALBcJ_P0064271	KH_1	PF00013.29	7.2e-70	3	4
MGP_BALBcJ_P0064271	KH_1	PF00013.29	7.2e-70	4	4
MGP_BALBcJ_P0064268	KH_1	PF00013.29	2.2e-69	1	4
MGP_BALBcJ_P0064268	KH_1	PF00013.29	2.2e-69	2	4
MGP_BALBcJ_P0064268	KH_1	PF00013.29	2.2e-69	3	4
MGP_BALBcJ_P0064268	KH_1	PF00013.29	2.2e-69	4	4
MGP_BALBcJ_P0064275	KH_1	PF00013.29	2.2e-69	1	4
MGP_BALBcJ_P0064275	KH_1	PF00013.29	2.2e-69	2	4
MGP_BALBcJ_P0064275	KH_1	PF00013.29	2.2e-69	3	4
MGP_BALBcJ_P0064275	KH_1	PF00013.29	2.2e-69	4	4
MGP_BALBcJ_P0064272	KH_1	PF00013.29	2.4e-69	1	4
MGP_BALBcJ_P0064272	KH_1	PF00013.29	2.4e-69	2	4
MGP_BALBcJ_P0064272	KH_1	PF00013.29	2.4e-69	3	4
MGP_BALBcJ_P0064272	KH_1	PF00013.29	2.4e-69	4	4
MGP_BALBcJ_P0064270	KH_1	PF00013.29	2.4e-69	1	4
MGP_BALBcJ_P0064270	KH_1	PF00013.29	2.4e-69	2	4
MGP_BALBcJ_P0064270	KH_1	PF00013.29	2.4e-69	3	4
MGP_BALBcJ_P0064270	KH_1	PF00013.29	2.4e-69	4	4
MGP_BALBcJ_P0064269	KH_1	PF00013.29	7.7e-38	1	2
MGP_BALBcJ_P0064269	KH_1	PF00013.29	7.7e-38	2	2
MGP_BALBcJ_P0064278	KH_1	PF00013.29	1.1e-16	1	1
MGP_BALBcJ_P0064271	KH_2	PF07650.17	1.3e-22	1	2
MGP_BALBcJ_P0064271	KH_2	PF07650.17	1.3e-22	2	2
MGP_BALBcJ_P0064275	KH_2	PF07650.17	3.4e-22	1	2
MGP_BALBcJ_P0064275	KH_2	PF07650.17	3.4e-22	2	2
MGP_BALBcJ_P0064272	KH_2	PF07650.17	3.6e-22	1	2
MGP_BALBcJ_P0064272	KH_2	PF07650.17	3.6e-22	2	2
MGP_BALBcJ_P0064270	KH_2	PF07650.17	3.7e-22	1	2
MGP_BALBcJ_P0064270	KH_2	PF07650.17	3.7e-22	2	2
MGP_BALBcJ_P0064268	KH_2	PF07650.17	3.7e-22	1	2
MGP_BALBcJ_P0064268	KH_2	PF07650.17	3.7e-22	2	2
MGP_BALBcJ_P0064269	KH_2	PF07650.17	3.8e-10	1	1
MGP_BALBcJ_P0064278	KH_2	PF07650.17	5.2e-06	1	1
MGP_BALBcJ_P0064282	DUF1897	PF09005.10	1.7e-12	1	2
MGP_BALBcJ_P0064282	DUF1897	PF09005.10	1.7e-12	2	2
MGP_BALBcJ_P0064280	DUF1897	PF09005.10	2.1e-12	1	2
MGP_BALBcJ_P0064280	DUF1897	PF09005.10	2.1e-12	2	2
MGP_BALBcJ_P0064268	DUF1897	PF09005.10	2.4e-11	1	2
MGP_BALBcJ_P0064268	DUF1897	PF09005.10	2.4e-11	2	2
MGP_BALBcJ_P0064275	DUF1897	PF09005.10	2.5e-11	1	2
MGP_BALBcJ_P0064275	DUF1897	PF09005.10	2.5e-11	2	2
MGP_BALBcJ_P0064272	DUF1897	PF09005.10	2.6e-11	1	2
MGP_BALBcJ_P0064272	DUF1897	PF09005.10	2.6e-11	2	2
MGP_BALBcJ_P0064270	DUF1897	PF09005.10	2.6e-11	1	2
MGP_BALBcJ_P0064270	DUF1897	PF09005.10	2.6e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0064284	-	424	-	-	- (aa)	-	-
MGP_BALBcJ_T0064269	-	1043	-	MGP_BALBcJ_P0064269	307 (aa)	-	-
MGP_BALBcJ_T0064268	-	6543	XM_006501660	MGP_BALBcJ_P0064268	643 (aa)	XP_006501723	Q91WJ8
MGP_BALBcJ_T0064285	-	4000	-	-	- (aa)	-	-
MGP_BALBcJ_T0064272	-	2529	-	MGP_BALBcJ_P0064272	652 (aa)	-	-
MGP_BALBcJ_T0064273	-	2095	-	MGP_BALBcJ_P0064273	70 (aa)	-	-
MGP_BALBcJ_T0064270	-	2555	-	MGP_BALBcJ_P0064270	655 (aa)	-	-
MGP_BALBcJ_T0064271	-	3166	-	MGP_BALBcJ_P0064271	524 (aa)	-	-
MGP_BALBcJ_T0064276	-	4528	-	MGP_BALBcJ_P0064276	643 (aa)	-	-
MGP_BALBcJ_T0064277	-	432	-	-	- (aa)	-	-
MGP_BALBcJ_T0064274	-	4866	-	MGP_BALBcJ_P0064274	701 (aa)	-	-
MGP_BALBcJ_T0064275	-	2377	-	MGP_BALBcJ_P0064275	644 (aa)	-	-
MGP_BALBcJ_T0064286	-	665	-	-	- (aa)	-	-
MGP_BALBcJ_T0064278	-	585	-	MGP_BALBcJ_P0064278	149 (aa)	-	-
MGP_BALBcJ_T0064279	-	512	-	-	- (aa)	-	-
MGP_BALBcJ_T0064283	-	5099	-	-	- (aa)	-	-
MGP_BALBcJ_T0064282	-	826	-	MGP_BALBcJ_P0064282	156 (aa)	-	-
MGP_BALBcJ_T0064281	-	800	-	MGP_BALBcJ_P0064281	173 (aa)	-	-
MGP_BALBcJ_T0064280	-	796	-	MGP_BALBcJ_P0064280	141 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0027959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0027959's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0027959	Fubp1	94	59.208	MGP_BALBcJ_G0025560	Fubp3	96	64.324
MGP_BALBcJ_G0027959	Fubp1	50	36.364	MGP_BALBcJ_G0019656	Nova1	57	36.364
MGP_BALBcJ_G0027959	Fubp1	72	34.524	MGP_BALBcJ_G0035205	Pcbp4	76	33.684
MGP_BALBcJ_G0027959	Fubp1	96	64.410	MGP_BALBcJ_G0023908	Khsrp	70	67.654
MGP_BALBcJ_G0027959	Fubp1	71	33.019	MGP_BALBcJ_G0017327	Pcbp3	66	31.250
MGP_BALBcJ_G0027959	Fubp1	61	36.765	MGP_BALBcJ_G0031730	Nova2	54	36.765
MGP_BALBcJ_G0027959	Fubp1	61	36.765	MGP_BALBcJ_G0031729	-	56	36.765
MGP_BALBcJ_G0027959	Fubp1	53	36.923	MGP_BALBcJ_G0020583	Hnrnpk	57	34.615