EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0028426 (Gene tree)
Gene ID: -
Gene Symbol: Elavl2
Alias: Hub|mel-N1
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 2 (Hu antigen B)
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 154300 bases
Position: chr4:88306626-88460925
Accession: 1100887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0066285	RRM_5	PF13893.6	1.3e-12	1	2
MGP_BALBcJ_P0066285	RRM_5	PF13893.6	1.3e-12	2	2
MGP_BALBcJ_P0066286	RRM_5	PF13893.6	1.4e-12	1	2
MGP_BALBcJ_P0066286	RRM_5	PF13893.6	1.4e-12	2	2
MGP_BALBcJ_P0066284	RRM_5	PF13893.6	1.7e-12	1	2
MGP_BALBcJ_P0066284	RRM_5	PF13893.6	1.7e-12	2	2
MGP_BALBcJ_P0066287	RRM_5	PF13893.6	1.9e-12	1	2
MGP_BALBcJ_P0066287	RRM_5	PF13893.6	1.9e-12	2	2
MGP_BALBcJ_P0066290	RRM_5	PF13893.6	2.1e-12	1	2
MGP_BALBcJ_P0066290	RRM_5	PF13893.6	2.1e-12	2	2
MGP_BALBcJ_P0066289	RRM_5	PF13893.6	2.2e-12	1	2
MGP_BALBcJ_P0066289	RRM_5	PF13893.6	2.2e-12	2	2
MGP_BALBcJ_P0066285	RRM_1	PF00076.22	1.2e-66	1	3
MGP_BALBcJ_P0066285	RRM_1	PF00076.22	1.2e-66	2	3
MGP_BALBcJ_P0066285	RRM_1	PF00076.22	1.2e-66	3	3
MGP_BALBcJ_P0066286	RRM_1	PF00076.22	1.4e-66	1	3
MGP_BALBcJ_P0066286	RRM_1	PF00076.22	1.4e-66	2	3
MGP_BALBcJ_P0066286	RRM_1	PF00076.22	1.4e-66	3	3
MGP_BALBcJ_P0066284	RRM_1	PF00076.22	1.6e-66	1	3
MGP_BALBcJ_P0066284	RRM_1	PF00076.22	1.6e-66	2	3
MGP_BALBcJ_P0066284	RRM_1	PF00076.22	1.6e-66	3	3
MGP_BALBcJ_P0066287	RRM_1	PF00076.22	1.7e-66	1	3
MGP_BALBcJ_P0066287	RRM_1	PF00076.22	1.7e-66	2	3
MGP_BALBcJ_P0066287	RRM_1	PF00076.22	1.7e-66	3	3
MGP_BALBcJ_P0066289	RRM_1	PF00076.22	2e-66	1	3
MGP_BALBcJ_P0066289	RRM_1	PF00076.22	2e-66	2	3
MGP_BALBcJ_P0066289	RRM_1	PF00076.22	2e-66	3	3
MGP_BALBcJ_P0066290	RRM_1	PF00076.22	2e-66	1	3
MGP_BALBcJ_P0066290	RRM_1	PF00076.22	2e-66	2	3
MGP_BALBcJ_P0066290	RRM_1	PF00076.22	2e-66	3	3
MGP_BALBcJ_P0066292	RRM_1	PF00076.22	7.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0066295	-	450	-	-	- (aa)	-	-
MGP_BALBcJ_T0066292	-	425	-	MGP_BALBcJ_P0066292	125 (aa)	-	-
MGP_BALBcJ_T0066293	-	408	-	MGP_BALBcJ_P0066293	83 (aa)	-	-
MGP_BALBcJ_T0066289	-	1167	-	MGP_BALBcJ_P0066289	388 (aa)	-	-
MGP_BALBcJ_T0066288	-	930	-	-	- (aa)	-	-
MGP_BALBcJ_T0066290	-	1282	-	MGP_BALBcJ_P0066290	389 (aa)	-	-
MGP_BALBcJ_T0066296	-	415	-	-	- (aa)	-	-
MGP_BALBcJ_T0066294	-	511	-	MGP_BALBcJ_P0066294	23 (aa)	-	-
MGP_BALBcJ_T0066291	-	3195	-	-	- (aa)	-	-
MGP_BALBcJ_T0066285	-	3671	-	MGP_BALBcJ_P0066285	347 (aa)	-	-
MGP_BALBcJ_T0066284	-	3840	XM_006502778	MGP_BALBcJ_P0066284	373 (aa)	XP_006502841	Q60899
MGP_BALBcJ_T0066287	-	3797	-	MGP_BALBcJ_P0066287	376 (aa)	-	-
MGP_BALBcJ_T0066286	-	3730	-	MGP_BALBcJ_P0066286	360 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0028426's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0028426's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0028426	Elavl2	64	37.500	MGP_BALBcJ_G0017426	Cirbp	76	37.500
MGP_BALBcJ_G0028426	Elavl2	85	41.975	MGP_BALBcJ_G0026107	Celf1	69	41.975
MGP_BALBcJ_G0028426	Elavl2	67	35.714	MGP_BALBcJ_G0030073	Snrnp35	60	37.500
MGP_BALBcJ_G0028426	Elavl2	89	34.940	MGP_BALBcJ_G0027162	Pabpc4l	96	34.940
MGP_BALBcJ_G0028426	Elavl2	93	34.615	MGP_BALBcJ_G0033066	Tial1	72	34.615
MGP_BALBcJ_G0028426	Elavl2	89	37.349	MGP_BALBcJ_G0021764	Pabpc1	58	37.349
MGP_BALBcJ_G0028426	Elavl2	69	37.209	MGP_BALBcJ_G0035377	Rbms3	83	37.222
MGP_BALBcJ_G0028426	Elavl2	89	76.375	MGP_BALBcJ_G0033314	Elavl1	94	76.375
MGP_BALBcJ_G0028426	Elavl2	83	39.506	MGP_BALBcJ_G0025305	Celf2	87	33.333
MGP_BALBcJ_G0028426	Elavl2	72	32.632	MGP_BALBcJ_G0018865	Msi2	70	31.250
MGP_BALBcJ_G0028426	Elavl2	78	40.741	MGP_BALBcJ_G0034875	Celf6	89	37.037
MGP_BALBcJ_G0028426	Elavl2	63	32.911	MGP_BALBcJ_G0035515	Rbm3	82	38.710
MGP_BALBcJ_G0028426	Elavl2	76	41.975	MGP_BALBcJ_G0027523	Celf3	63	41.975
MGP_BALBcJ_G0028426	Elavl2	66	30.952	MGP_BALBcJ_G0028850	Trnau1ap	98	30.952
MGP_BALBcJ_G0028426	Elavl2	59	33.784	MGP_BALBcJ_G0027596	Rbm8a	58	32.353
MGP_BALBcJ_G0028426	Elavl2	89	36.145	MGP_BALBcJ_G0024336	Pabpc2	59	36.145
MGP_BALBcJ_G0028426	Elavl2	92	34.940	MGP_BALBcJ_G0026809	Pabpc1l	64	34.940
MGP_BALBcJ_G0028426	Elavl2	73	34.831	MGP_BALBcJ_G0035718	Rbmx	86	34.831
MGP_BALBcJ_G0028426	Elavl2	96	34.615	MGP_BALBcJ_G0030954	Tia1	89	34.615
MGP_BALBcJ_G0028426	Elavl2	90	37.349	MGP_BALBcJ_G0023107	Pabpc6	60	37.349
MGP_BALBcJ_G0028426	Elavl2	89	37.037	MGP_BALBcJ_G0036017	Pabpc5	94	37.037
MGP_BALBcJ_G0028426	Elavl2	100	89.751	MGP_BALBcJ_G0028558	Elavl4	99	89.315
MGP_BALBcJ_G0028426	Elavl2	100	79.292	MGP_BALBcJ_G0034443	Elavl3	100	78.400
MGP_BALBcJ_G0028426	Elavl2	60	41.558	MGP_BALBcJ_G0025735	Rbms1	51	37.209
MGP_BALBcJ_G0028426	Elavl2	88	39.506	MGP_BALBcJ_G0024174	Celf4	91	37.037
MGP_BALBcJ_G0028426	Elavl2	89	34.940	MGP_BALBcJ_G0028720	Pabpc4	52	31.579