EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0028550 (Gene tree)
Gene ID: -
Gene Symbol: Calr4
Alias: 4933403L16Rik|AU017583
Full Name: calreticulin 4
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 35971 bases
Position: chr4:106245817-106281787
Accession: 2140435
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0066890	Calreticulin	PF00262.18	6.4e-76	1	2
MGP_BALBcJ_P0066890	Calreticulin	PF00262.18	6.4e-76	2	2
MGP_BALBcJ_P0066891	Calreticulin	PF00262.18	7e-52	1	2
MGP_BALBcJ_P0066891	Calreticulin	PF00262.18	7e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0066890	-	1320	XM_006502653	MGP_BALBcJ_P0066890	439 (aa)	XP_006502718	A2A8Z3
MGP_BALBcJ_T0066891	-	1583	-	MGP_BALBcJ_P0066891	313 (aa)	-	-
MGP_BALBcJ_T0066892	-	1604	-	MGP_BALBcJ_P0066892	419 (aa)	-	-
MGP_BALBcJ_T0066893	-	532	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0028550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0028550's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0028550	Calr4	77	35.250	MGP_BALBcJ_G0033807	Clgn	65	34.750
MGP_BALBcJ_G0028550	Calr4	77	66.667	MGP_BALBcJ_G0033849	Calr	82	66.181
MGP_BALBcJ_G0028550	Calr4	78	36.855	MGP_BALBcJ_G0018185	Canx	68	37.037
MGP_BALBcJ_G0028550	Calr4	86	46.277	MGP_BALBcJ_G0033757	Calr3	86	47.262