EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_BALBcJ_G0028850 (Gene tree)
Gene ID
-
Gene Symbol
Trnau1ap
Alias
1110007F05Rik|AA387999|SECp43|Secp43|Trspap1|WI1-2643G14.2
Full Name
tRNA selenocysteine 1 associated protein 1
Gene Type
protein_coding
Species
Mus_musculus_balbcj
Status
putative
Strand
Minus strand
Length
19114 bases
Position
chr4:129477591-129496704
Accession
1919037
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_BALBcJ_P0068221RRM_1PF00076.229.8e-2712
MGP_BALBcJ_P0068221RRM_1PF00076.229.8e-2722
MGP_BALBcJ_P0068222RRM_1PF00076.223.3e-1711
MGP_BALBcJ_P0068226RRM_1PF00076.221.6e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_BALBcJ_T0068232-621--- (aa)--
MGP_BALBcJ_T0068230-679--- (aa)--
MGP_BALBcJ_T0068231-371-MGP_BALBcJ_P006823170 (aa)--
MGP_BALBcJ_T0068229-663-MGP_BALBcJ_P006822949 (aa)--
MGP_BALBcJ_T0068228-553--- (aa)--
MGP_BALBcJ_T0068225-1017-MGP_BALBcJ_P006822586 (aa)--
MGP_BALBcJ_T0068224-650--- (aa)--
MGP_BALBcJ_T0068227-600-MGP_BALBcJ_P006822747 (aa)--
MGP_BALBcJ_T0068226-474-MGP_BALBcJ_P0068226146 (aa)--
MGP_BALBcJ_T0068221-1130XM_011250332MGP_BALBcJ_P0068221287 (aa)XP_011248634Q80VC6
MGP_BALBcJ_T0068223-1791--- (aa)--
MGP_BALBcJ_T0068222-961-MGP_BALBcJ_P0068222247 (aa)--
Gene Model
Click here to download MGP_BALBcJ_G0028850's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0028850's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_BALBcJ_G0028850Trnau1ap7930.198MGP_BALBcJ_G0030954Tia16031.285
MGP_BALBcJ_G0028850Trnau1ap6032.386MGP_BALBcJ_G0033066Tial17333.019
MGP_BALBcJ_G0028850Trnau1ap9830.952MGP_BALBcJ_G0028426Elavl26630.952
MGP_BALBcJ_G0028850Trnau1ap8834.211MGP_BALBcJ_G0027162Pabpc4l8931.875

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