EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0028948 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 49298 bases
Position: chr4:133602767-133652064
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0068656	RRM_1	PF00076.22	2.3e-43	1	3
MGP_BALBcJ_P0068656	RRM_1	PF00076.22	2.3e-43	2	3
MGP_BALBcJ_P0068656	RRM_1	PF00076.22	2.3e-43	3	3
MGP_BALBcJ_P0068659	RRM_1	PF00076.22	2.3e-43	1	3
MGP_BALBcJ_P0068659	RRM_1	PF00076.22	2.3e-43	2	3
MGP_BALBcJ_P0068659	RRM_1	PF00076.22	2.3e-43	3	3
MGP_BALBcJ_P0068657	RRM_1	PF00076.22	3.4e-43	1	3
MGP_BALBcJ_P0068657	RRM_1	PF00076.22	3.4e-43	2	3
MGP_BALBcJ_P0068657	RRM_1	PF00076.22	3.4e-43	3	3
MGP_BALBcJ_P0068658	RRM_1	PF00076.22	3.4e-43	1	3
MGP_BALBcJ_P0068658	RRM_1	PF00076.22	3.4e-43	2	3
MGP_BALBcJ_P0068658	RRM_1	PF00076.22	3.4e-43	3	3
MGP_BALBcJ_P0068662	RRM_1	PF00076.22	5.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0068663	-	292	-	MGP_BALBcJ_P0068663	73 (aa)	-	-
MGP_BALBcJ_T0068662	-	980	-	MGP_BALBcJ_P0068662	270 (aa)	-	-
MGP_BALBcJ_T0068665	-	3949	-	-	- (aa)	-	-
MGP_BALBcJ_T0068664	-	474	-	-	- (aa)	-	-
MGP_BALBcJ_T0068666	-	1912	-	-	- (aa)	-	-
MGP_BALBcJ_T0068661	-	576	-	MGP_BALBcJ_P0068661	72 (aa)	-	-
MGP_BALBcJ_T0068660	-	859	-	MGP_BALBcJ_P0068660	103 (aa)	-	-
MGP_BALBcJ_T0068656	-	2543	-	MGP_BALBcJ_P0068656	531 (aa)	-	-
MGP_BALBcJ_T0068657	-	21482	-	MGP_BALBcJ_P0068657	632 (aa)	-	-
MGP_BALBcJ_T0068658	-	2683	-	MGP_BALBcJ_P0068658	632 (aa)	-	-
MGP_BALBcJ_T0068659	-	2647	-	MGP_BALBcJ_P0068659	531 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0028948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0028948's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0028948	-	59	56.329	MGP_BALBcJ_G0027302	Rbm46	65	56.774
MGP_BALBcJ_G0028948	-	76	48.642	MGP_BALBcJ_G0029564	Rbm47	88	59.859
MGP_BALBcJ_G0028948	-	100	81.733	MGP_BALBcJ_G0035078	Syncrip	99	79.206
MGP_BALBcJ_G0028948	-	59	52.997	MGP_BALBcJ_G0025013	A1cf	52	53.896
MGP_BALBcJ_G0028948	-	57	37.908	MGP_BALBcJ_G0024256	Dnd1	62	33.040