EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0029484 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb49
Alias: 4930518A03Rik|Zfp509|Znf509
Full Name: zinc finger and BTB domain containing 49
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 30710 bases
Position: chr5:35865343-35896052
Accession: 1922329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0071434	zf-C2H2	PF00096.26	1.7e-35	1	7
MGP_BALBcJ_P0071434	zf-C2H2	PF00096.26	1.7e-35	2	7
MGP_BALBcJ_P0071434	zf-C2H2	PF00096.26	1.7e-35	3	7
MGP_BALBcJ_P0071434	zf-C2H2	PF00096.26	1.7e-35	4	7
MGP_BALBcJ_P0071434	zf-C2H2	PF00096.26	1.7e-35	5	7
MGP_BALBcJ_P0071434	zf-C2H2	PF00096.26	1.7e-35	6	7
MGP_BALBcJ_P0071434	zf-C2H2	PF00096.26	1.7e-35	7	7
MGP_BALBcJ_P0071439	zf-C2H2	PF00096.26	1.7e-09	1	2
MGP_BALBcJ_P0071439	zf-C2H2	PF00096.26	1.7e-09	2	2
MGP_BALBcJ_P0071442	zf-C2H2	PF00096.26	8e-06	1	1
MGP_BALBcJ_P0071434	zf-met	PF12874.7	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0071443	-	1337	-	-	- (aa)	-	-
MGP_BALBcJ_T0071442	-	2645	-	MGP_BALBcJ_P0071442	480 (aa)	-	-
MGP_BALBcJ_T0071441	-	420	-	MGP_BALBcJ_P0071441	51 (aa)	-	-
MGP_BALBcJ_T0071440	-	688	-	MGP_BALBcJ_P0071440	95 (aa)	-	-
MGP_BALBcJ_T0071436	-	1654	-	MGP_BALBcJ_P0071436	110 (aa)	-	-
MGP_BALBcJ_T0071437	-	2271	-	MGP_BALBcJ_P0071437	444 (aa)	-	-
MGP_BALBcJ_T0071434	-	2977	-	MGP_BALBcJ_P0071434	756 (aa)	-	-
MGP_BALBcJ_T0071435	-	2721	-	MGP_BALBcJ_P0071435	428 (aa)	-	-
MGP_BALBcJ_T0071433	-	2862	-	-	- (aa)	-	-
MGP_BALBcJ_T0071438	-	2028	-	MGP_BALBcJ_P0071438	65 (aa)	-	-
MGP_BALBcJ_T0071439	-	463	-	MGP_BALBcJ_P0071439	120 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0029484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0029484's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0029484	Zbtb49	66	47.222	MGP_BALBcJ_G0020223	Zkscan4	51	45.342
MGP_BALBcJ_G0029484	Zbtb49	68	48.611	MGP_BALBcJ_G0033743	Zfp709	89	47.423
MGP_BALBcJ_G0029484	Zbtb49	62	45.205	MGP_BALBcJ_G0018928	Zfp652	57	42.593
MGP_BALBcJ_G0029484	Zbtb49	74	47.297	MGP_BALBcJ_G0031807	Zfp61	50	47.938
MGP_BALBcJ_G0029484	Zbtb49	60	50.704	MGP_BALBcJ_G0031806	-	99	44.944
MGP_BALBcJ_G0029484	Zbtb49	82	50.000	MGP_BALBcJ_G0031808	Zfp94	76	48.454
MGP_BALBcJ_G0029484	Zbtb49	68	46.032	MGP_BALBcJ_G0026439	Zfp661	60	44.845
MGP_BALBcJ_G0029484	Zbtb49	78	47.143	MGP_BALBcJ_G0018290	Zfp672	96	48.214
MGP_BALBcJ_G0029484	Zbtb49	76	50.000	MGP_BALBcJ_G0033020	Zfp768	51	48.810
MGP_BALBcJ_G0029484	Zbtb49	95	48.611	MGP_BALBcJ_G0021980	Zfp251	69	49.741
MGP_BALBcJ_G0029484	Zbtb49	90	50.704	MGP_BALBcJ_G0027094	Mynn	85	45.128
MGP_BALBcJ_G0029484	Zbtb49	74	50.000	MGP_BALBcJ_G0031839	Zfp574	60	43.651
MGP_BALBcJ_G0029484	Zbtb49	89	50.000	MGP_BALBcJ_G0031974	Zfp420	98	48.744
MGP_BALBcJ_G0029484	Zbtb49	62	50.704	MGP_BALBcJ_G0023223	Zscan10	78	47.953
MGP_BALBcJ_G0029484	Zbtb49	73	49.275	MGP_BALBcJ_G0032107	Zfp715	62	45.026
MGP_BALBcJ_G0029484	Zbtb49	63	50.000	MGP_BALBcJ_G0018193	Zfp454	65	47.423
MGP_BALBcJ_G0029484	Zbtb49	62	47.887	MGP_BALBcJ_G0016495	Zbtb41	71	41.279
MGP_BALBcJ_G0029484	Zbtb49	60	45.714	MGP_BALBcJ_G0018526	Bcl6b	54	47.368
MGP_BALBcJ_G0029484	Zbtb49	91	50.000	MGP_BALBcJ_G0031910	Zfp974	90	44.041
MGP_BALBcJ_G0029484	Zbtb49	77	45.833	MGP_BALBcJ_G0023214	Zfp945	77	43.455
MGP_BALBcJ_G0029484	Zbtb49	62	47.887	MGP_BALBcJ_G0024567	Zfp236	62	43.023
MGP_BALBcJ_G0029484	Zbtb49	62	43.836	MGP_BALBcJ_G0035425	Zfp651	71	43.519
MGP_BALBcJ_G0029484	Zbtb49	62	46.479	MGP_BALBcJ_G0026586	Gzf1	66	44.103
MGP_BALBcJ_G0029484	Zbtb49	62	67.742	MGP_BALBcJ_G0029032	Zbtb17	62	50.909
MGP_BALBcJ_G0029484	Zbtb49	59	49.296	MGP_BALBcJ_G0031805	Zfp108	66	47.143
MGP_BALBcJ_G0029484	Zbtb49	78	46.479	MGP_BALBcJ_G0023192	Zfp677	79	46.500
MGP_BALBcJ_G0029484	Zbtb49	78	48.571	MGP_BALBcJ_G0023194	Zfp51	82	45.876
MGP_BALBcJ_G0029484	Zbtb49	61	50.704	MGP_BALBcJ_G0031801	Zfp235	63	50.000
MGP_BALBcJ_G0029484	Zbtb49	75	45.833	MGP_BALBcJ_G0020652	Zfp759	90	45.503
MGP_BALBcJ_G0029484	Zbtb49	64	48.052	MGP_BALBcJ_G0020651	Rslcan18	64	48.503
MGP_BALBcJ_G0029484	Zbtb49	85	45.714	MGP_BALBcJ_G0033744	Zfp882	85	46.114
MGP_BALBcJ_G0029484	Zbtb49	96	45.070	MGP_BALBcJ_G0030812	Prdm5	79	40.244
MGP_BALBcJ_G0029484	Zbtb49	62	51.786	MGP_BALBcJ_G0029820	Gfi1	100	49.219
MGP_BALBcJ_G0029484	Zbtb49	78	44.444	MGP_BALBcJ_G0034450	Zfp872	80	44.330
MGP_BALBcJ_G0029484	Zbtb49	60	45.588	MGP_BALBcJ_G0023200	Gm10226	100	47.561
MGP_BALBcJ_G0029484	Zbtb49	60	47.619	MGP_BALBcJ_G0023956	Zbtb14	65	46.753
MGP_BALBcJ_G0029484	Zbtb49	78	44.872	MGP_BALBcJ_G0018339	Zfp867	84	48.187
MGP_BALBcJ_G0029484	Zbtb49	76	48.611	MGP_BALBcJ_G0034117	Zfp1	63	49.485
MGP_BALBcJ_G0029484	Zbtb49	60	47.222	MGP_BALBcJ_G0030681	Repin1	95	38.889
MGP_BALBcJ_G0029484	Zbtb49	78	45.833	MGP_BALBcJ_G0031158	Zfp637	78	46.061
MGP_BALBcJ_G0029484	Zbtb49	63	55.882	MGP_BALBcJ_G0031550	Zfp628	53	41.949
MGP_BALBcJ_G0029484	Zbtb49	94	45.833	MGP_BALBcJ_G0026868	Zfp334	65	47.436