EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_BALBcJ_G0029564 (Gene tree)
Gene ID
-
Gene Symbol
Rbm47
Alias
9530077J19Rik
Full Name
RNA binding motif protein 47
Gene Type
protein_coding
Species
Mus_musculus_balbcj
Status
putative
Strand
Minus strand
Length
158233 bases
Position
chr5:63948897-64107129
Accession
2384294
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_BALBcJ_P0071906RRM_1PF00076.223.6e-3713
MGP_BALBcJ_P0071906RRM_1PF00076.223.6e-3723
MGP_BALBcJ_P0071906RRM_1PF00076.223.6e-3733
MGP_BALBcJ_P0071902RRM_1PF00076.225.7e-3713
MGP_BALBcJ_P0071902RRM_1PF00076.225.7e-3723
MGP_BALBcJ_P0071902RRM_1PF00076.225.7e-3733
MGP_BALBcJ_P0071903RRM_1PF00076.225.7e-3713
MGP_BALBcJ_P0071903RRM_1PF00076.225.7e-3723
MGP_BALBcJ_P0071903RRM_1PF00076.225.7e-3733
MGP_BALBcJ_P0071904RRM_1PF00076.225.7e-3713
MGP_BALBcJ_P0071904RRM_1PF00076.225.7e-3723
MGP_BALBcJ_P0071904RRM_1PF00076.225.7e-3733
MGP_BALBcJ_P0071905RRM_1PF00076.225.7e-3713
MGP_BALBcJ_P0071905RRM_1PF00076.225.7e-3723
MGP_BALBcJ_P0071905RRM_1PF00076.225.7e-3733
MGP_BALBcJ_P0071907RRM_1PF00076.225.7e-3713
MGP_BALBcJ_P0071907RRM_1PF00076.225.7e-3723
MGP_BALBcJ_P0071907RRM_1PF00076.225.7e-3733
MGP_BALBcJ_P0071908RRM_1PF00076.225.7e-3713
MGP_BALBcJ_P0071908RRM_1PF00076.225.7e-3723
MGP_BALBcJ_P0071908RRM_1PF00076.225.7e-3733
MGP_BALBcJ_P0071910RRM_1PF00076.222.9e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_BALBcJ_T0071915-464--- (aa)--
MGP_BALBcJ_T0071914-452--- (aa)--
MGP_BALBcJ_T0071908-2185-MGP_BALBcJ_P0071908590 (aa)--
MGP_BALBcJ_T0071909-2327--- (aa)--
MGP_BALBcJ_T0071911-504--- (aa)--
MGP_BALBcJ_T0071910-703-MGP_BALBcJ_P0071910158 (aa)--
MGP_BALBcJ_T0071913-530-MGP_BALBcJ_P00719136 (aa)--
MGP_BALBcJ_T0071912-332-MGP_BALBcJ_P007191213 (aa)--
MGP_BALBcJ_T0071902-4696XM_006503956MGP_BALBcJ_P0071902590 (aa)XP_006504019Q91WT8
MGP_BALBcJ_T0071903-5204-MGP_BALBcJ_P0071903590 (aa)--
MGP_BALBcJ_T0071906-2967-MGP_BALBcJ_P0071906521 (aa)--
MGP_BALBcJ_T0071907-3174-MGP_BALBcJ_P0071907590 (aa)--
MGP_BALBcJ_T0071904-4636-MGP_BALBcJ_P0071904590 (aa)--
MGP_BALBcJ_T0071905-4888-MGP_BALBcJ_P0071905590 (aa)--
Gene Model
Click here to download MGP_BALBcJ_G0029564's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0029564's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_BALBcJ_G0029564Rbm478967.376MGP_BALBcJ_G0025013A1cf7557.816
MGP_BALBcJ_G0029564Rbm478150.781MGP_BALBcJ_G0024256Dnd15841.748
MGP_BALBcJ_G0029564Rbm478859.859MGP_BALBcJ_G0028948-7648.642
MGP_BALBcJ_G0029564Rbm479473.649MGP_BALBcJ_G0027302Rbm466672.468
MGP_BALBcJ_G0029564Rbm478858.451MGP_BALBcJ_G0035078Syncrip7557.522

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