EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0029756 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpd
Alias: Auf1|Hnrpd
Full Name: heterogeneous nuclear ribonucleoprotein D
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 26238 bases
Position: chr5:98656957-98683194
Accession: 101947
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0072791	RRM_1	PF00076.22	4.5e-36	1	2
MGP_BALBcJ_P0072791	RRM_1	PF00076.22	4.5e-36	2	2
MGP_BALBcJ_P0072789	RRM_1	PF00076.22	5.7e-36	1	2
MGP_BALBcJ_P0072789	RRM_1	PF00076.22	5.7e-36	2	2
MGP_BALBcJ_P0072790	RRM_1	PF00076.22	8e-36	1	2
MGP_BALBcJ_P0072790	RRM_1	PF00076.22	8e-36	2	2
MGP_BALBcJ_P0072788	RRM_1	PF00076.22	9.6e-36	1	2
MGP_BALBcJ_P0072788	RRM_1	PF00076.22	9.6e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0072792	-	1117	-	MGP_BALBcJ_P0072792	215 (aa)	-	-
MGP_BALBcJ_T0072793	-	737	-	MGP_BALBcJ_P0072793	150 (aa)	-	-
MGP_BALBcJ_T0072790	-	1553	-	MGP_BALBcJ_P0072790	297 (aa)	-	-
MGP_BALBcJ_T0072791	-	1420	-	MGP_BALBcJ_P0072791	248 (aa)	-	-
MGP_BALBcJ_T0072796	-	425	-	-	- (aa)	-	-
MGP_BALBcJ_T0072794	-	699	-	MGP_BALBcJ_P0072794	131 (aa)	-	-
MGP_BALBcJ_T0072795	-	987	-	MGP_BALBcJ_P0072795	47 (aa)	-	-
MGP_BALBcJ_T0072789	-	1883	-	MGP_BALBcJ_P0072789	267 (aa)	-	-
MGP_BALBcJ_T0072788	-	6678	XM_006534735	MGP_BALBcJ_P0072788	316 (aa)	XP_006534798	Q60668

Gene Model

Click here to download MGP_BALBcJ_G0029756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0029756's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0029756	Hnrnpd	64	37.931	MGP_BALBcJ_G0035515	Rbm3	80	36.709
MGP_BALBcJ_G0029756	Hnrnpd	89	44.162	MGP_BALBcJ_G0029944	Msi1	62	42.857
MGP_BALBcJ_G0029756	Hnrnpd	68	37.931	MGP_BALBcJ_G0017426	Cirbp	83	37.113
MGP_BALBcJ_G0029756	Hnrnpd	89	58.025	MGP_BALBcJ_G0018865	Msi2	100	53.982
MGP_BALBcJ_G0029756	Hnrnpd	65	40.000	MGP_BALBcJ_G0035718	Rbmx	82	43.750
MGP_BALBcJ_G0029756	Hnrnpd	77	36.257	MGP_BALBcJ_G0020577	Hnrnpa0	73	36.323
MGP_BALBcJ_G0029756	Hnrnpd	69	35.294	MGP_BALBcJ_G0015973	Boll	50	35.294
MGP_BALBcJ_G0029756	Hnrnpd	75	51.389	MGP_BALBcJ_G0029110	Tardbp	77	38.194
MGP_BALBcJ_G0029756	Hnrnpd	80	72.674	MGP_BALBcJ_G0029758	Hnrnpdl	87	65.074
MGP_BALBcJ_G0029756	Hnrnpd	83	41.053	MGP_BALBcJ_G0030715	Hnrnpa2b1	72	41.148
MGP_BALBcJ_G0029756	Hnrnpd	82	37.705	MGP_BALBcJ_G0025828	Hnrnpa3	71	34.884
MGP_BALBcJ_G0029756	Hnrnpd	97	70.616	MGP_BALBcJ_G0018209	Hnrnpab	77	71.831
MGP_BALBcJ_G0029756	Hnrnpd	81	38.693	MGP_BALBcJ_G0017432	Dazap1	99	39.521