EuRBPDB

Description

Ensembl ID: MGP_BALBcJ_G0029758 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpdl
Alias: AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|HnrpdlGN|JKTBP|hnRNP DL|hnRNP-DL
Full Name: heterogeneous nuclear ribonucleoprotein D-like
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 6111 bases
Position: chr5:98740316-98746426
Accession: 1355299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0072800	RRM_1	PF00076.22	2.3e-33	1	2
MGP_BALBcJ_P0072800	RRM_1	PF00076.22	2.3e-33	2	2
MGP_BALBcJ_P0072799	RRM_1	PF00076.22	5.3e-33	1	2
MGP_BALBcJ_P0072799	RRM_1	PF00076.22	5.3e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0072802	-	884	-	-	- (aa)	-	-
MGP_BALBcJ_T0072803	-	1506	-	MGP_BALBcJ_P0072803	110 (aa)	-	-
MGP_BALBcJ_T0072800	-	2374	-	MGP_BALBcJ_P0072800	322 (aa)	-	-
MGP_BALBcJ_T0072801	-	2149	-	MGP_BALBcJ_P0072801	420 (aa)	-	-
MGP_BALBcJ_T0072804	-	846	-	-	- (aa)	-	-
MGP_BALBcJ_T0072798	-	1842	-	-	- (aa)	-	-
MGP_BALBcJ_T0072799	-	2752	-	MGP_BALBcJ_P0072799	420 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0029758	Hnrnpdl	54	36.709	MGP_BALBcJ_G0017426	Cirbp	73	36.709
MGP_BALBcJ_G0029758	Hnrnpdl	51	34.706	MGP_BALBcJ_G0020577	Hnrnpa0	56	34.706
MGP_BALBcJ_G0029758	Hnrnpdl	75	39.676	MGP_BALBcJ_G0029944	Msi1	58	48.052
MGP_BALBcJ_G0029758	Hnrnpdl	87	65.074	MGP_BALBcJ_G0029756	Hnrnpd	80	72.674
MGP_BALBcJ_G0029758	Hnrnpdl	89	57.292	MGP_BALBcJ_G0018209	Hnrnpab	82	58.419
MGP_BALBcJ_G0029758	Hnrnpdl	78	41.634	MGP_BALBcJ_G0018865	Msi2	100	54.867
MGP_BALBcJ_G0029758	Hnrnpdl	58	38.542	MGP_BALBcJ_G0030715	Hnrnpa2b1	58	38.824
MGP_BALBcJ_G0029758	Hnrnpdl	64	30.000	MGP_BALBcJ_G0029110	Tardbp	77	31.447
MGP_BALBcJ_G0029758	Hnrnpdl	69	36.036	MGP_BALBcJ_G0017432	Dazap1	99	39.881