EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0029820 (Gene tree)
Gene ID: -
Gene Symbol: Gfi1
Alias: AW495828|Gfi-1|Pal-1|Pal1
Full Name: growth factor independent 1
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 9805 bases
Position: chr5:106684492-106694296
Accession: 103170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0073082	zf-C2H2	PF00096.26	5e-28	1	6
MGP_BALBcJ_P0073082	zf-C2H2	PF00096.26	5e-28	2	6
MGP_BALBcJ_P0073082	zf-C2H2	PF00096.26	5e-28	3	6
MGP_BALBcJ_P0073082	zf-C2H2	PF00096.26	5e-28	4	6
MGP_BALBcJ_P0073082	zf-C2H2	PF00096.26	5e-28	5	6
MGP_BALBcJ_P0073082	zf-C2H2	PF00096.26	5e-28	6	6
MGP_BALBcJ_P0073083	zf-C2H2	PF00096.26	5e-28	1	6
MGP_BALBcJ_P0073083	zf-C2H2	PF00096.26	5e-28	2	6
MGP_BALBcJ_P0073083	zf-C2H2	PF00096.26	5e-28	3	6
MGP_BALBcJ_P0073083	zf-C2H2	PF00096.26	5e-28	4	6
MGP_BALBcJ_P0073083	zf-C2H2	PF00096.26	5e-28	5	6
MGP_BALBcJ_P0073083	zf-C2H2	PF00096.26	5e-28	6	6
MGP_BALBcJ_P0073084	zf-C2H2	PF00096.26	1.5e-27	1	6
MGP_BALBcJ_P0073084	zf-C2H2	PF00096.26	1.5e-27	2	6
MGP_BALBcJ_P0073084	zf-C2H2	PF00096.26	1.5e-27	3	6
MGP_BALBcJ_P0073084	zf-C2H2	PF00096.26	1.5e-27	4	6
MGP_BALBcJ_P0073084	zf-C2H2	PF00096.26	1.5e-27	5	6
MGP_BALBcJ_P0073084	zf-C2H2	PF00096.26	1.5e-27	6	6
MGP_BALBcJ_P0073085	zf-C2H2	PF00096.26	9.4e-25	1	4
MGP_BALBcJ_P0073085	zf-C2H2	PF00096.26	9.4e-25	2	4
MGP_BALBcJ_P0073085	zf-C2H2	PF00096.26	9.4e-25	3	4
MGP_BALBcJ_P0073085	zf-C2H2	PF00096.26	9.4e-25	4	4
MGP_BALBcJ_P0073085	zf-met	PF12874.7	2.2e-08	1	1
MGP_BALBcJ_P0073082	zf-met	PF12874.7	2.5e-07	1	1
MGP_BALBcJ_P0073083	zf-met	PF12874.7	2.5e-07	1	1
MGP_BALBcJ_P0073084	zf-met	PF12874.7	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0073085	-	1482	-	MGP_BALBcJ_P0073085	135 (aa)	-	-
MGP_BALBcJ_T0073084	-	2639	-	MGP_BALBcJ_P0073084	489 (aa)	-	-
MGP_BALBcJ_T0073086	-	689	-	MGP_BALBcJ_P0073086	186 (aa)	-	-
MGP_BALBcJ_T0073083	-	2860	-	MGP_BALBcJ_P0073083	423 (aa)	-	-
MGP_BALBcJ_T0073082	-	2648	XM_006534791	MGP_BALBcJ_P0073082	423 (aa)	XP_006534854	A0A0R4J292

Gene Model

Click here to download MGP_BALBcJ_G0029820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0029820's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0029820	Gfi1	99	44.444	MGP_BALBcJ_G0031561	Zfp784	71	44.444
MGP_BALBcJ_G0029820	Gfi1	100	54.321	MGP_BALBcJ_G0033020	Zfp768	51	45.833
MGP_BALBcJ_G0029820	Gfi1	100	45.794	MGP_BALBcJ_G0018193	Zfp454	68	42.262
MGP_BALBcJ_G0029820	Gfi1	100	48.031	MGP_BALBcJ_G0031910	Zfp974	89	48.031
MGP_BALBcJ_G0029820	Gfi1	100	47.788	MGP_BALBcJ_G0020651	Rslcan18	71	47.788
MGP_BALBcJ_G0029820	Gfi1	100	46.018	MGP_BALBcJ_G0020652	Zfp759	88	46.018
MGP_BALBcJ_G0029820	Gfi1	99	45.714	MGP_BALBcJ_G0031839	Zfp574	62	43.925
MGP_BALBcJ_G0029820	Gfi1	99	45.133	MGP_BALBcJ_G0030812	Prdm5	74	43.846
MGP_BALBcJ_G0029820	Gfi1	100	45.238	MGP_BALBcJ_G0018339	Zfp867	79	43.023
MGP_BALBcJ_G0029820	Gfi1	100	44.030	MGP_BALBcJ_G0034450	Zfp872	78	44.030
MGP_BALBcJ_G0029820	Gfi1	100	46.094	MGP_BALBcJ_G0033744	Zfp882	85	46.094
MGP_BALBcJ_G0029820	Gfi1	100	46.457	MGP_BALBcJ_G0034117	Zfp1	60	43.478
MGP_BALBcJ_G0029820	Gfi1	100	49.254	MGP_BALBcJ_G0021980	Zfp251	74	47.024
MGP_BALBcJ_G0029820	Gfi1	99	48.507	MGP_BALBcJ_G0026439	Zfp661	62	48.507
MGP_BALBcJ_G0029820	Gfi1	100	44.882	MGP_BALBcJ_G0032107	Zfp715	63	43.210
MGP_BALBcJ_G0029820	Gfi1	100	49.219	MGP_BALBcJ_G0029484	Zbtb49	62	51.786
MGP_BALBcJ_G0029820	Gfi1	100	46.739	MGP_BALBcJ_G0024567	Zfp236	54	46.739
MGP_BALBcJ_G0029820	Gfi1	100	42.857	MGP_BALBcJ_G0023223	Zscan10	77	42.771
MGP_BALBcJ_G0029820	Gfi1	100	39.535	MGP_BALBcJ_G0033958	Zfp319	93	40.116
MGP_BALBcJ_G0029820	Gfi1	100	47.368	MGP_BALBcJ_G0026906	Zfp64	70	38.298
MGP_BALBcJ_G0029820	Gfi1	100	48.031	MGP_BALBcJ_G0031801	Zfp235	61	46.377
MGP_BALBcJ_G0029820	Gfi1	100	48.031	MGP_BALBcJ_G0031806	-	98	48.031
MGP_BALBcJ_G0029820	Gfi1	100	50.427	MGP_BALBcJ_G0031805	Zfp108	65	45.000
MGP_BALBcJ_G0029820	Gfi1	100	46.457	MGP_BALBcJ_G0031808	Zfp94	65	44.970
MGP_BALBcJ_G0029820	Gfi1	100	45.312	MGP_BALBcJ_G0023192	Zfp677	82	43.452
MGP_BALBcJ_G0029820	Gfi1	100	45.522	MGP_BALBcJ_G0023194	Zfp51	76	44.828
MGP_BALBcJ_G0029820	Gfi1	100	48.507	MGP_BALBcJ_G0031974	Zfp420	98	48.507
MGP_BALBcJ_G0029820	Gfi1	99	47.287	MGP_BALBcJ_G0030681	Repin1	90	47.287
MGP_BALBcJ_G0029820	Gfi1	99	47.368	MGP_BALBcJ_G0031558	Zfp865	66	46.753
MGP_BALBcJ_G0029820	Gfi1	100	48.062	MGP_BALBcJ_G0031550	Zfp628	54	48.062
MGP_BALBcJ_G0029820	Gfi1	100	43.590	MGP_BALBcJ_G0031158	Zfp637	71	43.590
MGP_BALBcJ_G0029820	Gfi1	100	48.276	MGP_BALBcJ_G0018290	Zfp672	90	48.276
MGP_BALBcJ_G0029820	Gfi1	100	47.863	MGP_BALBcJ_G0026868	Zfp334	62	47.333
MGP_BALBcJ_G0029820	Gfi1	100	45.522	MGP_BALBcJ_G0033743	Zfp709	88	43.976