EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_BALBcJ_G0030013 (Gene tree)
Gene ID
-
Gene Symbol
Atxn2
Alias
9630045M23Rik|ATX2|AW544490|Sca2
Full Name
ataxin 2
Gene Type
protein_coding
Species
Mus_musculus_balbcj
Status
putative
Strand
Plus strand
Length
111522 bases
Position
chr5:121456009-121567530
Accession
1277223
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_BALBcJ_P0074043PAM2PF07145.158.9e-0711
MGP_BALBcJ_P0074041PAM2PF07145.151.7e-0611
MGP_BALBcJ_P0074046PAM2PF07145.151.9e-0611
MGP_BALBcJ_P0074043LsmADPF06741.138.1e-1611
MGP_BALBcJ_P0074041LsmADPF06741.131.3e-1511
MGP_BALBcJ_P0074044LsmADPF06741.133.7e-0711
MGP_BALBcJ_P0074041SM-ATXPF14438.67.4e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_BALBcJ_T0074040-461--- (aa)--
MGP_BALBcJ_T0074041-4307-MGP_BALBcJ_P00740411240 (aa)--
MGP_BALBcJ_T0074042-497--- (aa)--
MGP_BALBcJ_T0074043-3293-MGP_BALBcJ_P0074043929 (aa)--
MGP_BALBcJ_T0074044-990-MGP_BALBcJ_P0074044329 (aa)--
MGP_BALBcJ_T0074045-3124--- (aa)--
MGP_BALBcJ_T0074046-2343-MGP_BALBcJ_P0074046662 (aa)--
MGP_BALBcJ_T0074047-1003--- (aa)--
MGP_BALBcJ_T0074048-755--- (aa)--
MGP_BALBcJ_T0074049-240--- (aa)--
MGP_BALBcJ_T0074054-397-MGP_BALBcJ_P007405465 (aa)--
MGP_BALBcJ_T0074051-6946--- (aa)--
MGP_BALBcJ_T0074058-411-MGP_BALBcJ_P007405863 (aa)--
MGP_BALBcJ_T0074055-482--- (aa)--
MGP_BALBcJ_T0074050-754--- (aa)--
MGP_BALBcJ_T0074053-1467--- (aa)--
MGP_BALBcJ_T0074052-891-MGP_BALBcJ_P0074052234 (aa)--
MGP_BALBcJ_T0074057-388-MGP_BALBcJ_P007405796 (aa)--
MGP_BALBcJ_T0074056-578--- (aa)--
Gene Model
Click here to download MGP_BALBcJ_G0030013's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0030013's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_BALBcJ_G0030013Atxn29540.125MGP_BALBcJ_G0032972Atxn2l8055.682

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us