EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0030076 (Gene tree)
Gene ID: -
Gene Symbol: Ddx55
Alias: 2810021H22Rik|Kiaa1595|mKIAA1595
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 15478 bases
Position: chr5:124366685-124382162
Accession: 1915098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0074481	ResIII	PF04851.15	5.6e-07	1	1
MGP_BALBcJ_P0074481	DEAD	PF00270.29	1.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0074480	-	3516	-	MGP_BALBcJ_P0074480	135 (aa)	-	Q6ZPL9
MGP_BALBcJ_T0074481	-	2793	-	MGP_BALBcJ_P0074481	618 (aa)	-	-
MGP_BALBcJ_T0074482	-	445	-	-	- (aa)	-	-
MGP_BALBcJ_T0074483	-	477	-	-	- (aa)	-	-
MGP_BALBcJ_T0074484	-	1429	-	-	- (aa)	-	-
MGP_BALBcJ_T0074485	-	824	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0030076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0030076's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0030076	Ddx55	50	33.333	MGP_BALBcJ_G0022645	Eif4a2	75	33.333
MGP_BALBcJ_G0030076	Ddx55	58	32.044	MGP_BALBcJ_G0035037	Ddx43	53	32.044
MGP_BALBcJ_G0030076	Ddx55	58	30.769	MGP_BALBcJ_G0018486	Eif4a1	96	30.193
MGP_BALBcJ_G0030076	Ddx55	73	38.631	MGP_BALBcJ_G0034780	Ddx10	50	38.631
MGP_BALBcJ_G0030076	Ddx55	57	32.687	MGP_BALBcJ_G0022044	Ddx17	53	32.687
MGP_BALBcJ_G0030076	Ddx55	57	35.200	MGP_BALBcJ_G0035542	Ddx3x	54	35.106
MGP_BALBcJ_G0030076	Ddx55	56	33.056	MGP_BALBcJ_G0033678	Ddx49	92	33.238
MGP_BALBcJ_G0030076	Ddx55	58	30.886	MGP_BALBcJ_G0034048	Ddx28	69	30.886
MGP_BALBcJ_G0030076	Ddx55	72	31.528	MGP_BALBcJ_G0025506	Ddx31	74	31.528
MGP_BALBcJ_G0030076	Ddx55	57	35.635	MGP_BALBcJ_G0020552	Ddx41	55	35.440
MGP_BALBcJ_G0030076	Ddx55	57	30.137	MGP_BALBcJ_G0019255	Ddx5	65	30.137
MGP_BALBcJ_G0030076	Ddx55	61	30.750	MGP_BALBcJ_G0018803	Ddx52	62	30.750
MGP_BALBcJ_G0030076	Ddx55	77	35.551	MGP_BALBcJ_G0016355	Ddx18	68	35.699
MGP_BALBcJ_G0030076	Ddx55	57	35.977	MGP_BALBcJ_G0031394	Ddx47	81	35.977
MGP_BALBcJ_G0030076	Ddx55	56	31.429	MGP_BALBcJ_G0016484	Ddx59	54	31.429
MGP_BALBcJ_G0030076	Ddx55	57	35.733	MGP_BALBcJ_G0016858	D1Pas1	54	35.733