EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0030459 (Gene tree)
Gene ID: -
Gene Symbol: Lsm8
Alias: 2010003I05Rik|AW214405|Lsm8|Naa38
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 7173 bases
Position: chr6:15590165-15597337
Accession: 1923772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0076454	LSM	PF01423.22	4.4e-19	1	1
MGP_BALBcJ_P0076457	LSM	PF01423.22	2.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0076455	-	3305	-	-	- (aa)	-	-
MGP_BALBcJ_T0076454	-	807	-	MGP_BALBcJ_P0076454	96 (aa)	-	Q6ZWM4
MGP_BALBcJ_T0076457	-	503	-	MGP_BALBcJ_P0076457	100 (aa)	-	-
MGP_BALBcJ_T0076456	-	890	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0030459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0030459's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0030459	Lsm8	92	34.091	MGP_BALBcJ_G0033464	Lsm1	65	34.091
MGP_BALBcJ_G0030459	Lsm8	73	35.526	MGP_BALBcJ_G0017464	Gm10146	72	35.526