EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0030580 (Gene tree)
Gene ID: -
Gene Symbol: Mkrn1
Alias: RFP
Full Name: makorin%2C ring finger protein%2C 1
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 24857 bases
Position: chr6:36345370-36370226
Accession: 1859353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0077081	zf-CCCH	PF00642.24	1.4e-17	1	3
MGP_BALBcJ_P0077081	zf-CCCH	PF00642.24	1.4e-17	2	3
MGP_BALBcJ_P0077081	zf-CCCH	PF00642.24	1.4e-17	3	3
MGP_BALBcJ_P0077084	zf-CCCH	PF00642.24	1.9e-16	1	3
MGP_BALBcJ_P0077084	zf-CCCH	PF00642.24	1.9e-16	2	3
MGP_BALBcJ_P0077084	zf-CCCH	PF00642.24	1.9e-16	3	3
MGP_BALBcJ_P0077083	zf-CCCH	PF00642.24	1.5e-12	1	2
MGP_BALBcJ_P0077083	zf-CCCH	PF00642.24	1.5e-12	2	2
MGP_BALBcJ_P0077086	zf-CCCH	PF00642.24	1.3e-10	1	2
MGP_BALBcJ_P0077086	zf-CCCH	PF00642.24	1.3e-10	2	2
MGP_BALBcJ_P0077087	zf-CCCH	PF00642.24	3.3e-09	1	2
MGP_BALBcJ_P0077087	zf-CCCH	PF00642.24	3.3e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0077081	-	2866	XM_006506396	MGP_BALBcJ_P0077081	481 (aa)	XP_006506459	Q9QXP6
MGP_BALBcJ_T0077083	-	1485	-	MGP_BALBcJ_P0077083	343 (aa)	-	-
MGP_BALBcJ_T0077082	-	773	-	MGP_BALBcJ_P0077082	206 (aa)	-	-
MGP_BALBcJ_T0077085	-	584	-	-	- (aa)	-	-
MGP_BALBcJ_T0077084	-	1511	-	MGP_BALBcJ_P0077084	329 (aa)	-	-
MGP_BALBcJ_T0077087	-	751	-	MGP_BALBcJ_P0077087	196 (aa)	-	-
MGP_BALBcJ_T0077086	-	542	-	MGP_BALBcJ_P0077086	180 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0030580's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0030580's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0030580	Mkrn1	83	45.548	MGP_BALBcJ_G0031131	Mkrn2	95	45.679
MGP_BALBcJ_G0030580	Mkrn1	99	40.653	MGP_BALBcJ_G0032319	Mkrn3	83	47.210