EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0030954 (Gene tree)
Gene ID: -
Gene Symbol: Tia1
Alias: 2310050N03Rik|AI256674|TIA-1|Tia|mTIA-1
Full Name: cytotoxic granule-associated RNA binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 29289 bases
Position: chr6:84314384-84343672
Accession: 107914
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0078586	RRM_1	PF00076.22	4.5e-68	1	3
MGP_BALBcJ_P0078586	RRM_1	PF00076.22	4.5e-68	2	3
MGP_BALBcJ_P0078586	RRM_1	PF00076.22	4.5e-68	3	3
MGP_BALBcJ_P0078580	RRM_1	PF00076.22	1.9e-67	1	3
MGP_BALBcJ_P0078580	RRM_1	PF00076.22	1.9e-67	2	3
MGP_BALBcJ_P0078580	RRM_1	PF00076.22	1.9e-67	3	3
MGP_BALBcJ_P0078572	RRM_1	PF00076.22	2.1e-67	1	3
MGP_BALBcJ_P0078572	RRM_1	PF00076.22	2.1e-67	2	3
MGP_BALBcJ_P0078572	RRM_1	PF00076.22	2.1e-67	3	3
MGP_BALBcJ_P0078573	RRM_1	PF00076.22	2.1e-67	1	3
MGP_BALBcJ_P0078573	RRM_1	PF00076.22	2.1e-67	2	3
MGP_BALBcJ_P0078573	RRM_1	PF00076.22	2.1e-67	3	3
MGP_BALBcJ_P0078581	RRM_1	PF00076.22	2.3e-58	1	3
MGP_BALBcJ_P0078581	RRM_1	PF00076.22	2.3e-58	2	3
MGP_BALBcJ_P0078581	RRM_1	PF00076.22	2.3e-58	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0078578	-	1203	-	MGP_BALBcJ_P0078578	133 (aa)	-	-
MGP_BALBcJ_T0078579	-	3856	-	-	- (aa)	-	-
MGP_BALBcJ_T0078574	-	934	-	-	- (aa)	-	-
MGP_BALBcJ_T0078575	-	422	-	-	- (aa)	-	-
MGP_BALBcJ_T0078576	-	4420	-	-	- (aa)	-	-
MGP_BALBcJ_T0078577	-	612	-	-	- (aa)	-	-
MGP_BALBcJ_T0078572	-	1789	XM_006505889	MGP_BALBcJ_P0078572	385 (aa)	XP_006505952	P52912
MGP_BALBcJ_T0078573	-	4477	-	MGP_BALBcJ_P0078573	386 (aa)	-	-
MGP_BALBcJ_T0078589	-	1934	-	-	- (aa)	-	-
MGP_BALBcJ_T0078588	-	823	-	-	- (aa)	-	-
MGP_BALBcJ_T0078585	-	1178	-	-	- (aa)	-	-
MGP_BALBcJ_T0078584	-	4326	-	MGP_BALBcJ_P0078584	212 (aa)	-	-
MGP_BALBcJ_T0078587	-	864	-	-	- (aa)	-	-
MGP_BALBcJ_T0078586	-	3108	-	MGP_BALBcJ_P0078586	377 (aa)	-	-
MGP_BALBcJ_T0078581	-	1445	-	MGP_BALBcJ_P0078581	285 (aa)	-	-
MGP_BALBcJ_T0078580	-	3130	-	MGP_BALBcJ_P0078580	375 (aa)	-	-
MGP_BALBcJ_T0078583	-	797	-	-	- (aa)	-	-
MGP_BALBcJ_T0078582	-	1290	-	MGP_BALBcJ_P0078582	93 (aa)	-	-
MGP_BALBcJ_T0078592	-	750	-	-	- (aa)	-	-
MGP_BALBcJ_T0078593	-	759	-	-	- (aa)	-	-
MGP_BALBcJ_T0078590	-	2660	-	-	- (aa)	-	-
MGP_BALBcJ_T0078591	-	706	-	-	- (aa)	-	-
MGP_BALBcJ_T0078596	-	2563	-	-	- (aa)	-	-
MGP_BALBcJ_T0078597	-	716	-	-	- (aa)	-	-
MGP_BALBcJ_T0078594	-	628	-	-	- (aa)	-	-
MGP_BALBcJ_T0078595	-	877	-	-	- (aa)	-	-
MGP_BALBcJ_T0078598	-	585	-	-	- (aa)	-	-
MGP_BALBcJ_T0078599	-	597	-	MGP_BALBcJ_P0078599	105 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0030954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0030954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0030954	Tia1	87	38.095	MGP_BALBcJ_G0026809	Pabpc1l	59	38.095
MGP_BALBcJ_G0030954	Tia1	60	31.285	MGP_BALBcJ_G0028850	Trnau1ap	79	30.198
MGP_BALBcJ_G0030954	Tia1	70	41.333	MGP_BALBcJ_G0035515	Rbm3	99	35.955
MGP_BALBcJ_G0030954	Tia1	84	34.247	MGP_BALBcJ_G0036017	Pabpc5	93	33.333
MGP_BALBcJ_G0030954	Tia1	98	31.169	MGP_BALBcJ_G0034443	Elavl3	90	37.179
MGP_BALBcJ_G0030954	Tia1	87	38.095	MGP_BALBcJ_G0021764	Pabpc1	57	38.095
MGP_BALBcJ_G0030954	Tia1	95	33.333	MGP_BALBcJ_G0028720	Pabpc4	51	36.905
MGP_BALBcJ_G0030954	Tia1	87	39.759	MGP_BALBcJ_G0027577	Sf3b4	58	31.197
MGP_BALBcJ_G0030954	Tia1	78	36.000	MGP_BALBcJ_G0022692	Ncbp2	51	36.000
MGP_BALBcJ_G0030954	Tia1	87	32.911	MGP_BALBcJ_G0024174	Celf4	63	30.682
MGP_BALBcJ_G0030954	Tia1	83	35.443	MGP_BALBcJ_G0025305	Celf2	51	35.443
MGP_BALBcJ_G0030954	Tia1	79	35.165	MGP_BALBcJ_G0033782	-	51	35.165
MGP_BALBcJ_G0030954	Tia1	98	32.895	MGP_BALBcJ_G0028558	Elavl4	94	35.897
MGP_BALBcJ_G0030954	Tia1	97	86.992	MGP_BALBcJ_G0033066	Tial1	100	87.440
MGP_BALBcJ_G0030954	Tia1	89	34.615	MGP_BALBcJ_G0028426	Elavl2	96	34.615
MGP_BALBcJ_G0030954	Tia1	95	33.835	MGP_BALBcJ_G0024336	Pabpc2	57	35.443
MGP_BALBcJ_G0030954	Tia1	95	30.000	MGP_BALBcJ_G0027162	Pabpc4l	95	30.539
MGP_BALBcJ_G0030954	Tia1	77	35.870	MGP_BALBcJ_G0027596	Rbm8a	54	35.870
MGP_BALBcJ_G0030954	Tia1	93	38.667	MGP_BALBcJ_G0027523	Celf3	77	37.805
MGP_BALBcJ_G0030954	Tia1	99	31.579	MGP_BALBcJ_G0033314	Elavl1	95	32.298
MGP_BALBcJ_G0030954	Tia1	85	36.000	MGP_BALBcJ_G0034875	Celf6	62	32.955
MGP_BALBcJ_G0030954	Tia1	80	34.043	MGP_BALBcJ_G0035718	Rbmx	98	34.409
MGP_BALBcJ_G0030954	Tia1	96	36.905	MGP_BALBcJ_G0023107	Pabpc6	58	36.905
MGP_BALBcJ_G0030954	Tia1	80	37.778	MGP_BALBcJ_G0017426	Cirbp	91	35.714