EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0031885 (Gene tree)
Gene ID: -
Gene Symbol: Snrpa
Alias: C430021M15Rik|Rnu1a-1|Rnu1a1|U1 snRNP|U1-A|U1A
Full Name: small nuclear ribonucleoprotein polypeptide A
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 9266 bases
Position: chr7:25424246-25433511
Accession: 1855690
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0082479	RRM_5	PF13893.6	4.8e-07	1	2
MGP_BALBcJ_P0082479	RRM_5	PF13893.6	4.8e-07	2	2
MGP_BALBcJ_P0082480	RRM_5	PF13893.6	4.8e-07	1	2
MGP_BALBcJ_P0082480	RRM_5	PF13893.6	4.8e-07	2	2
MGP_BALBcJ_P0082481	RRM_5	PF13893.6	4.8e-07	1	2
MGP_BALBcJ_P0082481	RRM_5	PF13893.6	4.8e-07	2	2
MGP_BALBcJ_P0082479	RRM_1	PF00076.22	4.5e-28	1	2
MGP_BALBcJ_P0082479	RRM_1	PF00076.22	4.5e-28	2	2
MGP_BALBcJ_P0082480	RRM_1	PF00076.22	4.5e-28	1	2
MGP_BALBcJ_P0082480	RRM_1	PF00076.22	4.5e-28	2	2
MGP_BALBcJ_P0082481	RRM_1	PF00076.22	4.5e-28	1	2
MGP_BALBcJ_P0082481	RRM_1	PF00076.22	4.5e-28	2	2
MGP_BALBcJ_P0082482	RRM_1	PF00076.22	1.1e-18	1	2
MGP_BALBcJ_P0082482	RRM_1	PF00076.22	1.1e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0082484	-	1690	-	-	- (aa)	-	-
MGP_BALBcJ_T0082481	-	1365	-	MGP_BALBcJ_P0082481	287 (aa)	-	-
MGP_BALBcJ_T0082480	-	1336	-	MGP_BALBcJ_P0082480	287 (aa)	-	-
MGP_BALBcJ_T0082483	-	510	-	MGP_BALBcJ_P0082483	44 (aa)	-	-
MGP_BALBcJ_T0082482	-	968	-	MGP_BALBcJ_P0082482	247 (aa)	-	-
MGP_BALBcJ_T0082478	-	509	-	-	- (aa)	-	-
MGP_BALBcJ_T0082479	-	1288	-	MGP_BALBcJ_P0082479	287 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0031885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0031885's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0031885	Snrpa	97	55.235	MGP_BALBcJ_G0026550	Snrpb2	99	63.121