EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0031947 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpl
Alias: C79783|D830027H13Rik|Hnrpl
Full Name: heterogeneous nuclear ribonucleoprotein L
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 13800 bases
Position: chr7:27115540-27129339
Accession: 104816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0082709	RRM_5	PF13893.6	2.4e-60	1	2
MGP_BALBcJ_P0082709	RRM_5	PF13893.6	2.4e-60	2	2
MGP_BALBcJ_P0082713	RRM_5	PF13893.6	2.4e-60	1	2
MGP_BALBcJ_P0082713	RRM_5	PF13893.6	2.4e-60	2	2
MGP_BALBcJ_P0082714	RRM_5	PF13893.6	2.9e-60	1	2
MGP_BALBcJ_P0082714	RRM_5	PF13893.6	2.9e-60	2	2
MGP_BALBcJ_P0082711	RRM_5	PF13893.6	1.9e-59	1	2
MGP_BALBcJ_P0082711	RRM_5	PF13893.6	1.9e-59	2	2
MGP_BALBcJ_P0082709	RRM_1	PF00076.22	3.3e-22	1	2
MGP_BALBcJ_P0082709	RRM_1	PF00076.22	3.3e-22	2	2
MGP_BALBcJ_P0082713	RRM_1	PF00076.22	3.3e-22	1	2
MGP_BALBcJ_P0082713	RRM_1	PF00076.22	3.3e-22	2	2
MGP_BALBcJ_P0082714	RRM_1	PF00076.22	4.2e-22	1	2
MGP_BALBcJ_P0082714	RRM_1	PF00076.22	4.2e-22	2	2
MGP_BALBcJ_P0082711	RRM_1	PF00076.22	1.6e-16	1	1
MGP_BALBcJ_P0082712	RRM_1	PF00076.22	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0082719	-	1087	-	-	- (aa)	-	-
MGP_BALBcJ_T0082718	-	632	-	-	- (aa)	-	-
MGP_BALBcJ_T0082720	-	768	-	-	- (aa)	-	-
MGP_BALBcJ_T0082721	-	672	-	-	- (aa)	-	-
MGP_BALBcJ_T0082709	-	2679	XM_006539556	MGP_BALBcJ_P0082709	586 (aa)	XP_006539619	Q8R081
MGP_BALBcJ_T0082711	-	1898	-	MGP_BALBcJ_P0082711	456 (aa)	-	-
MGP_BALBcJ_T0082710	-	2274	-	-	- (aa)	-	-
MGP_BALBcJ_T0082713	-	2142	-	MGP_BALBcJ_P0082713	586 (aa)	-	-
MGP_BALBcJ_T0082712	-	502	-	MGP_BALBcJ_P0082712	112 (aa)	-	-
MGP_BALBcJ_T0082715	-	2425	-	-	- (aa)	-	-
MGP_BALBcJ_T0082714	-	2180	-	MGP_BALBcJ_P0082714	614 (aa)	-	-
MGP_BALBcJ_T0082717	-	504	-	-	- (aa)	-	-
MGP_BALBcJ_T0082716	-	1850	-	MGP_BALBcJ_P0082716	201 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0031947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0031947's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0031947	Hnrnpl	100	63.393	MGP_BALBcJ_G0024014	Hnrnpll	80	58.065
MGP_BALBcJ_G0031947	Hnrnpl	77	30.645	MGP_BALBcJ_G0027796	Ptbp2	77	30.645
MGP_BALBcJ_G0031947	Hnrnpl	95	30.045	MGP_BALBcJ_G0017403	Ptbp1	80	30.583
MGP_BALBcJ_G0031947	Hnrnpl	55	36.207	MGP_BALBcJ_G0028316	Ptbp3	83	35.537