EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0031974 (Gene tree)
Gene ID: -
Gene Symbol: Zfp420
Alias: B230119D13|B230312I18Rik|mszf59-1|mszf70
Full Name: zinc finger protein 420
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 15707 bases
Position: chr7:28232935-28248641
Accession: 2444666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_BALBcJ_P0082841	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_BALBcJ_P0082844	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_BALBcJ_P0082841	zf-met	PF12874.7	8.3e-08	1	1
MGP_BALBcJ_P0082844	zf-met	PF12874.7	8.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0082845	-	764	-	-	- (aa)	-	-
MGP_BALBcJ_T0082844	-	2744	-	MGP_BALBcJ_P0082844	578 (aa)	-	-
MGP_BALBcJ_T0082841	-	2537	XM_006539873	MGP_BALBcJ_P0082841	578 (aa)	XP_006539936	Q7TMN8
MGP_BALBcJ_T0082843	-	2976	-	-	- (aa)	-	-
MGP_BALBcJ_T0082842	-	689	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0031974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0031974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0031974	Zfp420	98	37.309	MGP_BALBcJ_G0033958	Zfp319	93	36.919
MGP_BALBcJ_G0031974	Zfp420	97	44.706	MGP_BALBcJ_G0029032	Zbtb17	69	44.706
MGP_BALBcJ_G0031974	Zfp420	99	50.909	MGP_BALBcJ_G0020223	Zkscan4	54	61.184
MGP_BALBcJ_G0031974	Zfp420	95	59.426	MGP_BALBcJ_G0026439	Zfp661	72	59.426
MGP_BALBcJ_G0031974	Zfp420	99	60.656	MGP_BALBcJ_G0021980	Zfp251	78	60.656
MGP_BALBcJ_G0031974	Zfp420	98	39.286	MGP_BALBcJ_G0026906	Zfp64	69	36.504
MGP_BALBcJ_G0031974	Zfp420	98	59.532	MGP_BALBcJ_G0018193	Zfp454	71	57.803
MGP_BALBcJ_G0031974	Zfp420	99	56.115	MGP_BALBcJ_G0033020	Zfp768	51	56.071
MGP_BALBcJ_G0031974	Zfp420	95	41.722	MGP_BALBcJ_G0030812	Prdm5	91	48.387
MGP_BALBcJ_G0031974	Zfp420	98	49.524	MGP_BALBcJ_G0018290	Zfp672	89	49.524
MGP_BALBcJ_G0031974	Zfp420	98	46.711	MGP_BALBcJ_G0030681	Repin1	93	46.711
MGP_BALBcJ_G0031974	Zfp420	98	48.507	MGP_BALBcJ_G0029820	Gfi1	100	48.507
MGP_BALBcJ_G0031974	Zfp420	98	50.000	MGP_BALBcJ_G0033744	Zfp882	85	50.000
MGP_BALBcJ_G0031974	Zfp420	97	56.897	MGP_BALBcJ_G0031158	Zfp637	75	54.167
MGP_BALBcJ_G0031974	Zfp420	97	41.080	MGP_BALBcJ_G0023223	Zscan10	78	40.179
MGP_BALBcJ_G0031974	Zfp420	99	37.634	MGP_BALBcJ_G0031558	Zfp865	80	37.634
MGP_BALBcJ_G0031974	Zfp420	95	30.691	MGP_BALBcJ_G0031559	-	66	31.343
MGP_BALBcJ_G0031974	Zfp420	98	38.136	MGP_BALBcJ_G0031550	Zfp628	60	38.748
MGP_BALBcJ_G0031974	Zfp420	99	51.052	MGP_BALBcJ_G0032107	Zfp715	71	51.316
MGP_BALBcJ_G0031974	Zfp420	98	51.337	MGP_BALBcJ_G0031910	Zfp974	97	51.337
MGP_BALBcJ_G0031974	Zfp420	99	52.489	MGP_BALBcJ_G0026868	Zfp334	75	52.489
MGP_BALBcJ_G0031974	Zfp420	99	57.692	MGP_BALBcJ_G0034117	Zfp1	78	57.692
MGP_BALBcJ_G0031974	Zfp420	98	54.648	MGP_BALBcJ_G0023192	Zfp677	89	54.648
MGP_BALBcJ_G0031974	Zfp420	98	54.475	MGP_BALBcJ_G0023194	Zfp51	88	54.308
MGP_BALBcJ_G0031974	Zfp420	99	59.854	MGP_BALBcJ_G0032098	-	78	59.854
MGP_BALBcJ_G0031974	Zfp420	99	47.059	MGP_BALBcJ_G0024567	Zfp236	79	47.059
MGP_BALBcJ_G0031974	Zfp420	98	51.882	MGP_BALBcJ_G0018339	Zfp867	82	51.882
MGP_BALBcJ_G0031974	Zfp420	99	36.677	MGP_BALBcJ_G0031839	Zfp574	93	37.533
MGP_BALBcJ_G0031974	Zfp420	99	54.233	MGP_BALBcJ_G0034450	Zfp872	86	53.608
MGP_BALBcJ_G0031974	Zfp420	98	48.744	MGP_BALBcJ_G0029484	Zbtb49	89	50.000
MGP_BALBcJ_G0031974	Zfp420	99	51.196	MGP_BALBcJ_G0020652	Zfp759	88	50.364
MGP_BALBcJ_G0031974	Zfp420	98	56.275	MGP_BALBcJ_G0020651	Rslcan18	71	56.275
MGP_BALBcJ_G0031974	Zfp420	100	54.023	MGP_BALBcJ_G0033743	Zfp709	91	54.310
MGP_BALBcJ_G0031974	Zfp420	99	55.556	MGP_BALBcJ_G0031805	Zfp108	79	55.556
MGP_BALBcJ_G0031974	Zfp420	97	58.065	MGP_BALBcJ_G0031806	-	98	58.065
MGP_BALBcJ_G0031974	Zfp420	99	56.356	MGP_BALBcJ_G0031807	Zfp61	59	56.356
MGP_BALBcJ_G0031974	Zfp420	98	53.398	MGP_BALBcJ_G0031800	Zfp112	67	53.398
MGP_BALBcJ_G0031974	Zfp420	99	56.553	MGP_BALBcJ_G0031801	Zfp235	72	56.553
MGP_BALBcJ_G0031974	Zfp420	99	57.095	MGP_BALBcJ_G0031808	Zfp94	82	57.095
MGP_BALBcJ_G0031974	Zfp420	99	50.270	MGP_BALBcJ_G0023214	Zfp945	98	51.032