EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0033014 (Gene tree)
Gene ID: -
Gene Symbol: Sept1
Alias: Diff6|PNUTL3|Pnutl3
Full Name: septin 1
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 18917 bases
Position: chr7:127707599-127726515
Accession: 1858916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0086789	MMR_HSR1	PF01926.23	2e-08	1	1
MGP_BALBcJ_P0086788	MMR_HSR1	PF01926.23	3.5e-08	1	1
MGP_BALBcJ_P0086786	MMR_HSR1	PF01926.23	5.2e-08	1	1
MGP_BALBcJ_P0086785	MMR_HSR1	PF01926.23	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0086791	-	242	-	-	- (aa)	-	-
MGP_BALBcJ_T0086790	-	821	-	-	- (aa)	-	-
MGP_BALBcJ_T0086792	-	713	-	-	- (aa)	-	-
MGP_BALBcJ_T0086786	-	1048	-	MGP_BALBcJ_P0086786	328 (aa)	-	-
MGP_BALBcJ_T0086787	-	789	-	-	- (aa)	-	-
MGP_BALBcJ_T0086784	-	590	-	-	- (aa)	-	-
MGP_BALBcJ_T0086785	-	1101	-	MGP_BALBcJ_P0086785	366 (aa)	-	-
MGP_BALBcJ_T0086788	-	706	-	MGP_BALBcJ_P0086788	186 (aa)	-	-
MGP_BALBcJ_T0086789	-	599	-	MGP_BALBcJ_P0086789	145 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0033014's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0033014's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0033014	Sept1	100	66.897	MGP_BALBcJ_G0018846	Sept4	94	66.514
MGP_BALBcJ_G0033014	Sept1	100	68.276	MGP_BALBcJ_G0022582	Sept5	93	63.068
MGP_BALBcJ_G0033014	Sept1	100	43.537	MGP_BALBcJ_G0017191	Sept10	71	40.064
MGP_BALBcJ_G0033014	Sept1	100	40.816	MGP_BALBcJ_G0029734	Sept11	76	40.762
MGP_BALBcJ_G0033014	Sept1	100	40.136	MGP_BALBcJ_G0035598	Sept6	76	41.349
MGP_BALBcJ_G0033014	Sept1	100	64.828	MGP_BALBcJ_G0016280	Sept2	100	60.748
MGP_BALBcJ_G0033014	Sept1	100	50.000	MGP_BALBcJ_G0019389	Sept9	83	46.000
MGP_BALBcJ_G0033014	Sept1	100	59.310	MGP_BALBcJ_G0034466	Sept7	76	49.709
MGP_BALBcJ_G0033014	Sept1	100	50.685	MGP_BALBcJ_G0022106	Sept3	86	46.575
MGP_BALBcJ_G0033014	Sept1	100	38.095	MGP_BALBcJ_G0018238	Sept8	76	36.765
MGP_BALBcJ_G0033014	Sept1	100	47.260	MGP_BALBcJ_G0022446	Sept12	77	43.775