EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0087059	RRM_1	PF00076.22	2.2e-63	1	3
MGP_BALBcJ_P0087059	RRM_1	PF00076.22	2.2e-63	2	3
MGP_BALBcJ_P0087059	RRM_1	PF00076.22	2.2e-63	3	3
MGP_BALBcJ_P0087062	RRM_1	PF00076.22	2.2e-63	1	3
MGP_BALBcJ_P0087062	RRM_1	PF00076.22	2.2e-63	2	3
MGP_BALBcJ_P0087062	RRM_1	PF00076.22	2.2e-63	3	3
MGP_BALBcJ_P0087056	RRM_1	PF00076.22	3.1e-60	1	3
MGP_BALBcJ_P0087056	RRM_1	PF00076.22	3.1e-60	2	3
MGP_BALBcJ_P0087056	RRM_1	PF00076.22	3.1e-60	3	3
MGP_BALBcJ_P0087058	RRM_1	PF00076.22	7.6e-51	1	3
MGP_BALBcJ_P0087058	RRM_1	PF00076.22	7.6e-51	2	3
MGP_BALBcJ_P0087058	RRM_1	PF00076.22	7.6e-51	3	3
MGP_BALBcJ_P0087064	RRM_1	PF00076.22	1.8e-26	1	2
MGP_BALBcJ_P0087064	RRM_1	PF00076.22	1.8e-26	2	2
MGP_BALBcJ_P0087061	RRM_1	PF00076.22	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0087059	-	2033	-	MGP_BALBcJ_P0087059	375 (aa)	-	-
MGP_BALBcJ_T0087058	-	2835	-	MGP_BALBcJ_P0087058	336 (aa)	-	-
MGP_BALBcJ_T0087066	-	560	-	-	- (aa)	-	-
MGP_BALBcJ_T0087067	-	804	-	MGP_BALBcJ_P0087067	140 (aa)	-	-
MGP_BALBcJ_T0087060	-	953	-	MGP_BALBcJ_P0087060	106 (aa)	-	-
MGP_BALBcJ_T0087061	-	562	-	MGP_BALBcJ_P0087061	107 (aa)	-	-
MGP_BALBcJ_T0087062	-	1580	-	MGP_BALBcJ_P0087062	375 (aa)	-	-
MGP_BALBcJ_T0087063	-	2319	-	MGP_BALBcJ_P0087063	135 (aa)	-	-
MGP_BALBcJ_T0087068	-	1808	-	-	- (aa)	-	-
MGP_BALBcJ_T0087069	-	674	-	-	- (aa)	-	-
MGP_BALBcJ_T0087057	-	4257	-	-	- (aa)	-	-
MGP_BALBcJ_T0087056	-	4442	XM_006507570	MGP_BALBcJ_P0087056	392 (aa)	XP_006507633	P70318
MGP_BALBcJ_T0087065	-	784	-	MGP_BALBcJ_P0087065	41 (aa)	-	-
MGP_BALBcJ_T0087064	-	1344	-	MGP_BALBcJ_P0087064	244 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0033066	Tial1	73	37.179	MGP_BALBcJ_G0034443	Elavl3	90	37.179
MGP_BALBcJ_G0033066	Tial1	62	32.184	MGP_BALBcJ_G0022692	Ncbp2	71	33.333
MGP_BALBcJ_G0033066	Tial1	94	31.008	MGP_BALBcJ_G0021764	Pabpc1	56	34.783
MGP_BALBcJ_G0033066	Tial1	92	32.500	MGP_BALBcJ_G0024336	Pabpc2	50	35.036
MGP_BALBcJ_G0033066	Tial1	94	30.233	MGP_BALBcJ_G0028720	Pabpc4	51	31.250
MGP_BALBcJ_G0033066	Tial1	100	87.440	MGP_BALBcJ_G0030954	Tia1	97	86.992
MGP_BALBcJ_G0033066	Tial1	67	40.244	MGP_BALBcJ_G0017426	Cirbp	85	40.244
MGP_BALBcJ_G0033066	Tial1	99	31.618	MGP_BALBcJ_G0027162	Pabpc4l	94	33.333
MGP_BALBcJ_G0033066	Tial1	73	33.019	MGP_BALBcJ_G0028850	Trnau1ap	60	32.386
MGP_BALBcJ_G0033066	Tial1	67	30.769	MGP_BALBcJ_G0033314	Elavl1	95	30.769
MGP_BALBcJ_G0033066	Tial1	91	33.594	MGP_BALBcJ_G0027577	Sf3b4	56	31.390
MGP_BALBcJ_G0033066	Tial1	73	35.897	MGP_BALBcJ_G0028558	Elavl4	88	35.897
MGP_BALBcJ_G0033066	Tial1	94	31.783	MGP_BALBcJ_G0023107	Pabpc6	56	34.014
MGP_BALBcJ_G0033066	Tial1	72	34.615	MGP_BALBcJ_G0028426	Elavl2	93	34.615
MGP_BALBcJ_G0033066	Tial1	73	32.000	MGP_BALBcJ_G0027302	Rbm46	52	30.000
MGP_BALBcJ_G0033066	Tial1	53	32.143	MGP_BALBcJ_G0034875	Celf6	54	31.818
MGP_BALBcJ_G0033066	Tial1	65	31.481	MGP_BALBcJ_G0025305	Celf2	61	34.177
MGP_BALBcJ_G0033066	Tial1	69	31.469	MGP_BALBcJ_G0029944	Msi1	56	41.379
MGP_BALBcJ_G0033066	Tial1	81	31.111	MGP_BALBcJ_G0019413	Rbfox3	53	31.868
MGP_BALBcJ_G0033066	Tial1	81	37.333	MGP_BALBcJ_G0027523	Celf3	70	34.091
MGP_BALBcJ_G0033066	Tial1	64	31.461	MGP_BALBcJ_G0035718	Rbmx	90	32.258