EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0033314 (Gene tree)
Gene ID: -
Gene Symbol: Elavl1
Alias: 2410055N02Rik|Elra|HUR|HuR|Hua|W91709
Full Name: ELAV (embryonic lethal%2C abnormal vision)-like 1 (Hu antigen R)
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 41482 bases
Position: chr8:1272875-1314356
Accession: 1100851
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0088087	RRM_5	PF13893.6	2.8e-10	1	2
MGP_BALBcJ_P0088087	RRM_5	PF13893.6	2.8e-10	2	2
MGP_BALBcJ_P0088087	RRM_1	PF00076.22	1.1e-61	1	3
MGP_BALBcJ_P0088087	RRM_1	PF00076.22	1.1e-61	2	3
MGP_BALBcJ_P0088087	RRM_1	PF00076.22	1.1e-61	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0088087	-	6030	XM_006508698	MGP_BALBcJ_P0088087	326 (aa)	XP_006508761	P70372

Gene Model

Click here to download MGP_BALBcJ_G0033314's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0033314's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0033314	Elavl1	51	34.177	MGP_BALBcJ_G0035718	Rbmx	85	34.177
MGP_BALBcJ_G0033314	Elavl1	95	32.298	MGP_BALBcJ_G0030954	Tia1	99	31.579
MGP_BALBcJ_G0033314	Elavl1	81	43.210	MGP_BALBcJ_G0025305	Celf2	64	43.210
MGP_BALBcJ_G0033314	Elavl1	95	66.265	MGP_BALBcJ_G0034443	Elavl3	90	66.867
MGP_BALBcJ_G0033314	Elavl1	97	44.444	MGP_BALBcJ_G0034875	Celf6	57	44.444
MGP_BALBcJ_G0033314	Elavl1	95	43.210	MGP_BALBcJ_G0024174	Celf4	73	36.232
MGP_BALBcJ_G0033314	Elavl1	95	33.553	MGP_BALBcJ_G0028720	Pabpc4	52	33.553
MGP_BALBcJ_G0033314	Elavl1	50	33.333	MGP_BALBcJ_G0018209	Hnrnpab	53	33.333
MGP_BALBcJ_G0033314	Elavl1	91	30.464	MGP_BALBcJ_G0027162	Pabpc4l	94	30.464
MGP_BALBcJ_G0033314	Elavl1	59	31.481	MGP_BALBcJ_G0029110	Tardbp	72	38.806
MGP_BALBcJ_G0033314	Elavl1	95	30.769	MGP_BALBcJ_G0033066	Tial1	67	30.769
MGP_BALBcJ_G0033314	Elavl1	91	34.356	MGP_BALBcJ_G0035377	Rbms3	97	34.356
MGP_BALBcJ_G0033314	Elavl1	75	33.333	MGP_BALBcJ_G0017426	Cirbp	82	33.333
MGP_BALBcJ_G0033314	Elavl1	95	32.450	MGP_BALBcJ_G0021764	Pabpc1	57	32.450
MGP_BALBcJ_G0033314	Elavl1	98	73.585	MGP_BALBcJ_G0028558	Elavl4	89	73.585
MGP_BALBcJ_G0033314	Elavl1	83	45.679	MGP_BALBcJ_G0026107	Celf1	61	45.679
MGP_BALBcJ_G0033314	Elavl1	94	76.375	MGP_BALBcJ_G0028426	Elavl2	89	76.375
MGP_BALBcJ_G0033314	Elavl1	95	44.444	MGP_BALBcJ_G0027523	Celf3	98	35.632
MGP_BALBcJ_G0033314	Elavl1	74	32.000	MGP_BALBcJ_G0027596	Rbm8a	62	32.000