EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0033529 (Gene tree)
Gene ID: -
Gene Symbol: Cnot7
Alias: AU022737|CAF-1|Caf1|Pop2
Full Name: CCR4-NOT transcription complex%2C subunit 7
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 23132 bases
Position: chr8:37886754-37909885
Accession: 1298230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0088678	CAF1	PF04857.20	3.5e-22	1	2
MGP_BALBcJ_P0088678	CAF1	PF04857.20	3.5e-22	2	2
MGP_BALBcJ_P0088679	CAF1	PF04857.20	3.5e-22	1	2
MGP_BALBcJ_P0088679	CAF1	PF04857.20	3.5e-22	2	2
MGP_BALBcJ_P0088682	CAF1	PF04857.20	3.5e-22	1	2
MGP_BALBcJ_P0088682	CAF1	PF04857.20	3.5e-22	2	2
MGP_BALBcJ_P0088681	CAF1	PF04857.20	6.1e-19	1	2
MGP_BALBcJ_P0088681	CAF1	PF04857.20	6.1e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0088688	-	483	-	-	- (aa)	-	-
MGP_BALBcJ_T0088689	-	406	-	-	- (aa)	-	-
MGP_BALBcJ_T0088681	-	2462	-	MGP_BALBcJ_P0088681	248 (aa)	-	-
MGP_BALBcJ_T0088680	-	3813	-	-	- (aa)	-	-
MGP_BALBcJ_T0088678	-	2616	XM_006509306	MGP_BALBcJ_P0088678	285 (aa)	XP_006509369	Q60809
MGP_BALBcJ_T0088679	-	2542	-	MGP_BALBcJ_P0088679	285 (aa)	-	-
MGP_BALBcJ_T0088683	-	679	-	-	- (aa)	-	-
MGP_BALBcJ_T0088682	-	2975	-	MGP_BALBcJ_P0088682	285 (aa)	-	-
MGP_BALBcJ_T0088684	-	840	-	-	- (aa)	-	-
MGP_BALBcJ_T0088687	-	726	-	-	- (aa)	-	-
MGP_BALBcJ_T0088686	-	312	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0033529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0033529's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0033529	Cnot7	99	76.596	MGP_BALBcJ_G0018283	Cnot8	97	76.596