EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0033678 (Gene tree)
Gene ID: -
Gene Symbol: Ddx49
Alias: R27090_2
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 9584 bases
Position: chr8:67907960-67917543
Accession: 2136689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0089200	ResIII	PF04851.15	4.2e-06	1	1
MGP_BALBcJ_P0089200	DEAD	PF00270.29	7.4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0089204	-	1447	-	-	- (aa)	-	-
MGP_BALBcJ_T0089205	-	300	-	-	- (aa)	-	-
MGP_BALBcJ_T0089202	-	599	-	-	- (aa)	-	-
MGP_BALBcJ_T0089203	-	1105	-	MGP_BALBcJ_P0089203	354 (aa)	-	-
MGP_BALBcJ_T0089200	-	2137	-	MGP_BALBcJ_P0089200	480 (aa)	-	Q4FZF3
MGP_BALBcJ_T0089201	-	2163	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0033678's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0033678's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0033678	Ddx49	93	30.175	MGP_BALBcJ_G0029867	Ddx51	71	30.573
MGP_BALBcJ_G0033678	Ddx49	76	30.081	MGP_BALBcJ_G0018803	Ddx52	61	30.081
MGP_BALBcJ_G0033678	Ddx49	95	33.616	MGP_BALBcJ_G0020888	Ddx4	52	33.687
MGP_BALBcJ_G0033678	Ddx49	95	31.953	MGP_BALBcJ_G0019421	Eif4a3	91	32.190
MGP_BALBcJ_G0033678	Ddx49	94	32.440	MGP_BALBcJ_G0018486	Eif4a1	92	32.808
MGP_BALBcJ_G0033678	Ddx49	95	33.138	MGP_BALBcJ_G0016484	Ddx59	58	32.609
MGP_BALBcJ_G0033678	Ddx49	96	40.909	MGP_BALBcJ_G0019548	Ddx1	63	40.909
MGP_BALBcJ_G0033678	Ddx49	97	38.177	MGP_BALBcJ_G0026882	Ddx27	59	33.696
MGP_BALBcJ_G0033678	Ddx49	97	49.271	MGP_BALBcJ_G0031394	Ddx47	95	45.824
MGP_BALBcJ_G0033678	Ddx49	97	33.333	MGP_BALBcJ_G0033815	Ddx39	87	33.156
MGP_BALBcJ_G0033678	Ddx49	92	32.402	MGP_BALBcJ_G0034048	Ddx28	68	31.649
MGP_BALBcJ_G0033678	Ddx49	90	37.500	MGP_BALBcJ_G0016858	D1Pas1	55	36.316
MGP_BALBcJ_G0033678	Ddx49	96	33.333	MGP_BALBcJ_G0020552	Ddx41	62	32.921
MGP_BALBcJ_G0033678	Ddx49	98	32.741	MGP_BALBcJ_G0025506	Ddx31	63	31.136
MGP_BALBcJ_G0033678	Ddx49	91	39.521	MGP_BALBcJ_G0022044	Ddx17	56	37.903
MGP_BALBcJ_G0033678	Ddx49	64	35.294	MGP_BALBcJ_G0034106	Ddx19b	71	32.847
MGP_BALBcJ_G0033678	Ddx49	93	34.897	MGP_BALBcJ_G0035037	Ddx43	60	34.913
MGP_BALBcJ_G0033678	Ddx49	92	37.160	MGP_BALBcJ_G0016355	Ddx18	56	35.356
MGP_BALBcJ_G0033678	Ddx49	97	35.311	MGP_BALBcJ_G0019255	Ddx5	76	34.062
MGP_BALBcJ_G0033678	Ddx49	88	37.931	MGP_BALBcJ_G0022645	Eif4a2	90	30.539
MGP_BALBcJ_G0033678	Ddx49	59	33.175	MGP_BALBcJ_G0017959	Ddx56	94	32.627
MGP_BALBcJ_G0033678	Ddx49	90	36.919	MGP_BALBcJ_G0035542	Ddx3x	55	35.789
MGP_BALBcJ_G0033678	Ddx49	92	33.238	MGP_BALBcJ_G0030076	Ddx55	56	33.056