EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0034443 (Gene tree)
Gene ID: -
Gene Symbol: Elavl3
Alias: 2600009P04Rik|Huc|PLE21|mHuC
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 3 (Hu antigen C)
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 36726 bases
Position: chr9:18801219-18837944
Accession: 109157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0091483	RRM_5	PF13893.6	4.1e-13	1	2
MGP_BALBcJ_P0091483	RRM_5	PF13893.6	4.1e-13	2	2
MGP_BALBcJ_P0091483	RRM_1	PF00076.22	5.4e-64	1	3
MGP_BALBcJ_P0091483	RRM_1	PF00076.22	5.4e-64	2	3
MGP_BALBcJ_P0091483	RRM_1	PF00076.22	5.4e-64	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0091484	-	1014	-	MGP_BALBcJ_P0091484	337 (aa)	-	-
MGP_BALBcJ_T0091483	-	5013	XM_006510021	MGP_BALBcJ_P0091483	367 (aa)	XP_006510084	Q60900

Gene Model

Click here to download MGP_BALBcJ_G0034443's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0034443's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0034443	Elavl3	70	39.506	MGP_BALBcJ_G0024174	Celf4	67	39.744
MGP_BALBcJ_G0034443	Elavl3	90	37.179	MGP_BALBcJ_G0033066	Tial1	73	37.179
MGP_BALBcJ_G0034443	Elavl3	80	41.975	MGP_BALBcJ_G0034875	Celf6	57	42.308
MGP_BALBcJ_G0034443	Elavl3	99	80.323	MGP_BALBcJ_G0028558	Elavl4	99	79.893
MGP_BALBcJ_G0034443	Elavl3	71	42.391	MGP_BALBcJ_G0026107	Celf1	57	43.590
MGP_BALBcJ_G0034443	Elavl3	90	36.145	MGP_BALBcJ_G0027162	Pabpc4l	96	36.145
MGP_BALBcJ_G0034443	Elavl3	90	66.867	MGP_BALBcJ_G0033314	Elavl1	95	66.265
MGP_BALBcJ_G0034443	Elavl3	90	37.179	MGP_BALBcJ_G0030954	Tia1	98	31.169
MGP_BALBcJ_G0034443	Elavl3	59	30.488	MGP_BALBcJ_G0026809	Pabpc1l	63	38.889
MGP_BALBcJ_G0034443	Elavl3	62	37.500	MGP_BALBcJ_G0017426	Cirbp	79	37.500
MGP_BALBcJ_G0034443	Elavl3	92	36.145	MGP_BALBcJ_G0023107	Pabpc6	61	36.145
MGP_BALBcJ_G0034443	Elavl3	73	40.741	MGP_BALBcJ_G0025305	Celf2	82	34.667
MGP_BALBcJ_G0034443	Elavl3	50	36.207	MGP_BALBcJ_G0025735	Rbms1	51	33.645
MGP_BALBcJ_G0034443	Elavl3	89	34.940	MGP_BALBcJ_G0027523	Celf3	98	35.632
MGP_BALBcJ_G0034443	Elavl3	63	37.931	MGP_BALBcJ_G0035377	Rbms3	70	38.562
MGP_BALBcJ_G0034443	Elavl3	100	78.400	MGP_BALBcJ_G0028426	Elavl2	100	79.292
MGP_BALBcJ_G0034443	Elavl3	69	33.708	MGP_BALBcJ_G0035718	Rbmx	86	33.708
MGP_BALBcJ_G0034443	Elavl3	90	34.940	MGP_BALBcJ_G0024336	Pabpc2	61	34.940
MGP_BALBcJ_G0034443	Elavl3	92	36.145	MGP_BALBcJ_G0021764	Pabpc1	58	36.145