EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0034450 (Gene tree)
Gene ID: -
Gene Symbol: Zfp872
Alias: 9530015I07Rik
Full Name: zinc finger protein 872
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 15845 bases
Position: chr9:18975229-18991073
Accession: 3588272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0091500	zf-C2H2	PF00096.26	6.2e-50	1	9
MGP_BALBcJ_P0091500	zf-C2H2	PF00096.26	6.2e-50	2	9
MGP_BALBcJ_P0091500	zf-C2H2	PF00096.26	6.2e-50	3	9
MGP_BALBcJ_P0091500	zf-C2H2	PF00096.26	6.2e-50	4	9
MGP_BALBcJ_P0091500	zf-C2H2	PF00096.26	6.2e-50	5	9
MGP_BALBcJ_P0091500	zf-C2H2	PF00096.26	6.2e-50	6	9
MGP_BALBcJ_P0091500	zf-C2H2	PF00096.26	6.2e-50	7	9
MGP_BALBcJ_P0091500	zf-C2H2	PF00096.26	6.2e-50	8	9
MGP_BALBcJ_P0091500	zf-C2H2	PF00096.26	6.2e-50	9	9
MGP_BALBcJ_P0091499	zf-C2H2	PF00096.26	6.4e-50	1	9
MGP_BALBcJ_P0091499	zf-C2H2	PF00096.26	6.4e-50	2	9
MGP_BALBcJ_P0091499	zf-C2H2	PF00096.26	6.4e-50	3	9
MGP_BALBcJ_P0091499	zf-C2H2	PF00096.26	6.4e-50	4	9
MGP_BALBcJ_P0091499	zf-C2H2	PF00096.26	6.4e-50	5	9
MGP_BALBcJ_P0091499	zf-C2H2	PF00096.26	6.4e-50	6	9
MGP_BALBcJ_P0091499	zf-C2H2	PF00096.26	6.4e-50	7	9
MGP_BALBcJ_P0091499	zf-C2H2	PF00096.26	6.4e-50	8	9
MGP_BALBcJ_P0091499	zf-C2H2	PF00096.26	6.4e-50	9	9
MGP_BALBcJ_P0091500	zf-met	PF12874.7	8.9e-05	1	1
MGP_BALBcJ_P0091499	zf-met	PF12874.7	9.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0091499	-	2958	-	MGP_BALBcJ_P0091499	465 (aa)	-	F7APL9
MGP_BALBcJ_T0091500	-	1395	-	MGP_BALBcJ_P0091500	464 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0034450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0034450's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0034450	Zfp872	99	45.113	MGP_BALBcJ_G0034117	Zfp1	98	45.113
MGP_BALBcJ_G0034450	Zfp872	99	45.773	MGP_BALBcJ_G0023192	Zfp677	98	45.773
MGP_BALBcJ_G0034450	Zfp872	84	46.226	MGP_BALBcJ_G0031839	Zfp574	93	46.226
MGP_BALBcJ_G0034450	Zfp872	99	53.118	MGP_BALBcJ_G0018339	Zfp867	95	53.187
MGP_BALBcJ_G0034450	Zfp872	99	42.211	MGP_BALBcJ_G0026868	Zfp334	99	41.928
MGP_BALBcJ_G0034450	Zfp872	99	53.571	MGP_BALBcJ_G0021980	Zfp251	68	54.027
MGP_BALBcJ_G0034450	Zfp872	80	34.050	MGP_BALBcJ_G0026906	Zfp64	71	34.082
MGP_BALBcJ_G0034450	Zfp872	95	45.552	MGP_BALBcJ_G0031808	Zfp94	96	45.552
MGP_BALBcJ_G0034450	Zfp872	86	51.672	MGP_BALBcJ_G0031800	Zfp112	69	52.038
MGP_BALBcJ_G0034450	Zfp872	94	48.159	MGP_BALBcJ_G0031801	Zfp235	75	48.159
MGP_BALBcJ_G0034450	Zfp872	86	49.206	MGP_BALBcJ_G0031805	Zfp108	68	49.206
MGP_BALBcJ_G0034450	Zfp872	82	55.747	MGP_BALBcJ_G0031806	-	98	55.747
MGP_BALBcJ_G0034450	Zfp872	94	58.140	MGP_BALBcJ_G0031807	Zfp61	63	58.140
MGP_BALBcJ_G0034450	Zfp872	81	47.191	MGP_BALBcJ_G0031550	Zfp628	60	46.114
MGP_BALBcJ_G0034450	Zfp872	99	43.333	MGP_BALBcJ_G0023214	Zfp945	95	44.904
MGP_BALBcJ_G0034450	Zfp872	96	53.982	MGP_BALBcJ_G0031158	Zfp637	88	53.982
MGP_BALBcJ_G0034450	Zfp872	78	44.030	MGP_BALBcJ_G0029820	Gfi1	100	44.030
MGP_BALBcJ_G0034450	Zfp872	82	34.140	MGP_BALBcJ_G0033958	Zfp319	90	34.722
MGP_BALBcJ_G0034450	Zfp872	80	44.330	MGP_BALBcJ_G0029484	Zbtb49	78	44.444
MGP_BALBcJ_G0034450	Zfp872	99	46.667	MGP_BALBcJ_G0018193	Zfp454	98	46.667
MGP_BALBcJ_G0034450	Zfp872	99	48.746	MGP_BALBcJ_G0026439	Zfp661	94	48.507
MGP_BALBcJ_G0034450	Zfp872	86	53.608	MGP_BALBcJ_G0031974	Zfp420	99	54.233
MGP_BALBcJ_G0034450	Zfp872	99	44.118	MGP_BALBcJ_G0023194	Zfp51	94	44.836
MGP_BALBcJ_G0034450	Zfp872	87	38.342	MGP_BALBcJ_G0018928	Zfp652	69	36.054
MGP_BALBcJ_G0034450	Zfp872	87	56.369	MGP_BALBcJ_G0033743	Zfp709	96	58.900
MGP_BALBcJ_G0034450	Zfp872	83	41.964	MGP_BALBcJ_G0029032	Zbtb17	56	42.638
MGP_BALBcJ_G0034450	Zfp872	99	48.447	MGP_BALBcJ_G0020652	Zfp759	99	46.000
MGP_BALBcJ_G0034450	Zfp872	100	50.368	MGP_BALBcJ_G0020651	Rslcan18	80	47.959
MGP_BALBcJ_G0034450	Zfp872	84	48.162	MGP_BALBcJ_G0033020	Zfp768	51	47.426
MGP_BALBcJ_G0034450	Zfp872	93	34.726	MGP_BALBcJ_G0018290	Zfp672	100	40.000
MGP_BALBcJ_G0034450	Zfp872	97	48.780	MGP_BALBcJ_G0032098	-	69	48.343
MGP_BALBcJ_G0034450	Zfp872	99	40.530	MGP_BALBcJ_G0030812	Prdm5	82	40.076
MGP_BALBcJ_G0034450	Zfp872	94	40.800	MGP_BALBcJ_G0024567	Zfp236	62	44.318
MGP_BALBcJ_G0034450	Zfp872	99	50.284	MGP_BALBcJ_G0033744	Zfp882	97	44.991
MGP_BALBcJ_G0034450	Zfp872	80	35.266	MGP_BALBcJ_G0031561	Zfp784	77	34.762
MGP_BALBcJ_G0034450	Zfp872	97	39.935	MGP_BALBcJ_G0023223	Zscan10	80	39.935
MGP_BALBcJ_G0034450	Zfp872	95	51.220	MGP_BALBcJ_G0032107	Zfp715	75	51.220
MGP_BALBcJ_G0034450	Zfp872	84	44.156	MGP_BALBcJ_G0031558	Zfp865	78	35.776
MGP_BALBcJ_G0034450	Zfp872	96	33.159	MGP_BALBcJ_G0030681	Repin1	98	33.159
MGP_BALBcJ_G0034450	Zfp872	86	44.667	MGP_BALBcJ_G0031910	Zfp974	90	44.482