EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0034875 (Gene tree)
Gene ID: -
Gene Symbol: Celf6
Alias: 6330569O16Rik|Brunol6
Full Name: CUGBP%2C Elav-like family member 6
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 29135 bases
Position: chr9:56778814-56807948
Accession: 1923433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0092654	RRM_1	PF00076.22	2.1e-51	1	3
MGP_BALBcJ_P0092654	RRM_1	PF00076.22	2.1e-51	2	3
MGP_BALBcJ_P0092654	RRM_1	PF00076.22	2.1e-51	3	3
MGP_BALBcJ_P0092652	RRM_1	PF00076.22	2.6e-51	1	3
MGP_BALBcJ_P0092652	RRM_1	PF00076.22	2.6e-51	2	3
MGP_BALBcJ_P0092652	RRM_1	PF00076.22	2.6e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0092651	-	3073	XM_006511540	MGP_BALBcJ_P0092651	182 (aa)	XP_006511603	Q7TN33
MGP_BALBcJ_T0092653	-	2910	-	MGP_BALBcJ_P0092653	162 (aa)	-	-
MGP_BALBcJ_T0092652	-	2959	-	MGP_BALBcJ_P0092652	481 (aa)	-	-
MGP_BALBcJ_T0092655	-	449	-	-	- (aa)	-	-
MGP_BALBcJ_T0092654	-	2715	-	MGP_BALBcJ_P0092654	460 (aa)	-	-
MGP_BALBcJ_T0092656	-	591	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0034875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0034875's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0034875	Celf6	95	35.802	MGP_BALBcJ_G0028558	Elavl4	85	40.741
MGP_BALBcJ_G0034875	Celf6	54	31.818	MGP_BALBcJ_G0033066	Tial1	53	32.143
MGP_BALBcJ_G0034875	Celf6	51	34.483	MGP_BALBcJ_G0036017	Pabpc5	63	34.483
MGP_BALBcJ_G0034875	Celf6	91	45.567	MGP_BALBcJ_G0025305	Celf2	79	80.952
MGP_BALBcJ_G0034875	Celf6	66	32.500	MGP_BALBcJ_G0018209	Hnrnpab	65	31.414
MGP_BALBcJ_G0034875	Celf6	91	45.549	MGP_BALBcJ_G0026107	Celf1	98	45.135
MGP_BALBcJ_G0034875	Celf6	79	31.250	MGP_BALBcJ_G0030715	Hnrnpa2b1	66	32.143
MGP_BALBcJ_G0034875	Celf6	54	35.802	MGP_BALBcJ_G0017788	Rbms2	50	35.802
MGP_BALBcJ_G0034875	Celf6	89	37.037	MGP_BALBcJ_G0028426	Elavl2	78	40.741
MGP_BALBcJ_G0034875	Celf6	54	31.193	MGP_BALBcJ_G0033782	-	56	36.986
MGP_BALBcJ_G0034875	Celf6	52	42.105	MGP_BALBcJ_G0035377	Rbms3	82	42.105
MGP_BALBcJ_G0034875	Celf6	100	67.200	MGP_BALBcJ_G0024174	Celf4	99	67.066
MGP_BALBcJ_G0034875	Celf6	75	85.526	MGP_BALBcJ_G0027523	Celf3	81	87.368
MGP_BALBcJ_G0034875	Celf6	62	32.955	MGP_BALBcJ_G0030954	Tia1	85	36.000
MGP_BALBcJ_G0034875	Celf6	57	42.308	MGP_BALBcJ_G0034443	Elavl3	80	41.975
MGP_BALBcJ_G0034875	Celf6	57	44.444	MGP_BALBcJ_G0033314	Elavl1	97	44.444
MGP_BALBcJ_G0034875	Celf6	77	39.062	MGP_BALBcJ_G0023107	Pabpc6	64	39.062
MGP_BALBcJ_G0034875	Celf6	75	85.401	MGP_BALBcJ_G0017500	Celf5	95	60.477