EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0035037 (Gene tree)
Gene ID: -
Gene Symbol: Ddx43
Alias: ENSMUSG00000070291|OTTMUSG00000019690
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 27701 bases
Position: chr9:75832845-75860545
Accession: 3642857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0093336	KH_1	PF00013.29	4.5e-12	1	1
MGP_BALBcJ_P0093336	DEAD	PF00270.29	2.6e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0093336	-	2207	-	MGP_BALBcJ_P0093336	646 (aa)	-	D3Z6P9

Gene Model

Click here to download MGP_BALBcJ_G0035037's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0035037's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0035037	Ddx43	60	39.012	MGP_BALBcJ_G0016858	D1Pas1	61	39.012
MGP_BALBcJ_G0035037	Ddx43	62	33.580	MGP_BALBcJ_G0016484	Ddx59	64	33.333
MGP_BALBcJ_G0035037	Ddx43	59	35.678	MGP_BALBcJ_G0031394	Ddx47	91	34.218
MGP_BALBcJ_G0035037	Ddx43	68	43.527	MGP_BALBcJ_G0022044	Ddx17	67	43.527
MGP_BALBcJ_G0035037	Ddx43	54	31.831	MGP_BALBcJ_G0019421	Eif4a3	84	31.831
MGP_BALBcJ_G0035037	Ddx43	63	40.757	MGP_BALBcJ_G0022270	Ddx23	54	40.757
MGP_BALBcJ_G0035037	Ddx43	54	33.799	MGP_BALBcJ_G0017241	Ddx50	53	33.799
MGP_BALBcJ_G0035037	Ddx43	52	30.383	MGP_BALBcJ_G0022645	Eif4a2	92	30.383
MGP_BALBcJ_G0035037	Ddx43	63	34.135	MGP_BALBcJ_G0018803	Ddx52	69	34.135
MGP_BALBcJ_G0035037	Ddx43	58	31.332	MGP_BALBcJ_G0018486	Eif4a1	92	31.332
MGP_BALBcJ_G0035037	Ddx43	64	36.941	MGP_BALBcJ_G0020552	Ddx41	65	37.232
MGP_BALBcJ_G0035037	Ddx43	54	30.159	MGP_BALBcJ_G0034048	Ddx28	70	30.423
MGP_BALBcJ_G0035037	Ddx43	74	36.270	MGP_BALBcJ_G0019240	Ddx42	50	36.270
MGP_BALBcJ_G0035037	Ddx43	53	32.044	MGP_BALBcJ_G0030076	Ddx55	58	32.044
MGP_BALBcJ_G0035037	Ddx43	57	40.310	MGP_BALBcJ_G0035542	Ddx3x	61	39.259
MGP_BALBcJ_G0035037	Ddx43	60	34.913	MGP_BALBcJ_G0033678	Ddx49	93	34.897
MGP_BALBcJ_G0035037	Ddx43	68	44.519	MGP_BALBcJ_G0019255	Ddx5	89	45.040
MGP_BALBcJ_G0035037	Ddx43	60	40.000	MGP_BALBcJ_G0020888	Ddx4	56	40.000
MGP_BALBcJ_G0035037	Ddx43	55	34.545	MGP_BALBcJ_G0016355	Ddx18	56	34.456