EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0035104 (Gene tree)
Gene ID: -
Gene Symbol: Plod2
Alias: D530025C14Rik|LH2|Plod-2|lysyl hydroxylase 2
Full Name: procollagen lysine%2C 2-oxoglutarate 5-dioxygenase 2
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 65927 bases
Position: chr9:90001571-90067497
Accession: 1347007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0093647	2OG-FeII_Oxy	PF03171.20	1.3e-05	1	1
MGP_BALBcJ_P0093648	2OG-FeII_Oxy	PF03171.20	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0093650	-	596	-	-	- (aa)	-	-
MGP_BALBcJ_T0093647	-	3645	-	MGP_BALBcJ_P0093647	737 (aa)	-	Q9R0B9
MGP_BALBcJ_T0093651	-	1276	-	-	- (aa)	-	-
MGP_BALBcJ_T0093649	-	844	-	-	- (aa)	-	-
MGP_BALBcJ_T0093648	-	3659	-	MGP_BALBcJ_P0093648	758 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0035104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0035104's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0035104	Plod2	95	59.829	MGP_BALBcJ_G0030191	Plod3	100	57.895
MGP_BALBcJ_G0035104	Plod2	95	60.313	MGP_BALBcJ_G0029091	Plod1	99	59.041