EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0035199 (Gene tree)
Gene ID: -
Gene Symbol: Poc1a
Alias: 2510040D07Rik|Wdr51a|cha
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 69892 bases
Position: chr9:103860611-103930502
Accession: 1917485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0094113	eIF2A	PF08662.11	2.2e-10	1	1
MGP_BALBcJ_P0094112	eIF2A	PF08662.11	3.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0094112	-	1695	XM_006511831	MGP_BALBcJ_P0094112	405 (aa)	XP_006511894	Q8JZX3
MGP_BALBcJ_T0094113	-	1242	-	MGP_BALBcJ_P0094113	356 (aa)	-	-
MGP_BALBcJ_T0094114	-	1541	-	-	- (aa)	-	-
MGP_BALBcJ_T0094115	-	727	-	-	- (aa)	-	-
MGP_BALBcJ_T0094116	-	526	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0035199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0035199's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0035199	Poc1a	83	35.714	MGP_BALBcJ_G0025488	Wdr5	99	30.973
MGP_BALBcJ_G0035199	Poc1a	82	30.000	MGP_BALBcJ_G0028332	Prpf4	56	30.000
MGP_BALBcJ_G0035199	Poc1a	81	32.941	MGP_BALBcJ_G0034802	Wdr61	97	32.161
MGP_BALBcJ_G0035199	Poc1a	80	30.037	MGP_BALBcJ_G0024829	Prpf19	55	30.037
MGP_BALBcJ_G0035199	Poc1a	82	32.636	MGP_BALBcJ_G0020814	Utp15	52	32.636
MGP_BALBcJ_G0035199	Poc1a	80	38.000	MGP_BALBcJ_G0026429	Ciao1	85	38.000
MGP_BALBcJ_G0035199	Poc1a	93	33.333	MGP_BALBcJ_G0027637	Wdr3	58	33.333