EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_BALBcJ_G0035653 (Gene tree)
Gene ID
-
Gene Symbol
Smarca1
Alias
5730494M04Rik|Snf2l
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type
protein_coding
Species
Mus_musculus_balbcj
Status
putative
Strand
Minus strand
Length
76221 bases
Position
chrX:42462959-42539179
Accession
1935127
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_BALBcJ_P0096020ResIIIPF04851.154.3e-1211
MGP_BALBcJ_P0096019ResIIIPF04851.151.1e-1111
MGP_BALBcJ_P0096017ResIIIPF04851.151.8e-1111
MGP_BALBcJ_P0096016ResIIIPF04851.151.8e-1111
MGP_BALBcJ_P0096018ResIIIPF04851.151.8e-1111
MGP_BALBcJ_P0096016DEADPF00270.291.2e-0611
MGP_BALBcJ_P0096018DEADPF00270.291.2e-0611
MGP_BALBcJ_P0096017DEADPF00270.291.3e-0611
MGP_BALBcJ_P0096020DEADPF00270.292.4e-0611
MGP_BALBcJ_P0096019DEADPF00270.293.2e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_BALBcJ_T0096019-2304-MGP_BALBcJ_P0096019768 (aa)--
MGP_BALBcJ_T0096018-4798-MGP_BALBcJ_P00960181046 (aa)--
MGP_BALBcJ_T0096017-3991-MGP_BALBcJ_P00960171062 (aa)--
MGP_BALBcJ_T0096016-4024XM_006541563MGP_BALBcJ_P00960161046 (aa)XP_006541626Q6PGB8
MGP_BALBcJ_T0096022-409--- (aa)--
MGP_BALBcJ_T0096020-1965-MGP_BALBcJ_P0096020381 (aa)--
MGP_BALBcJ_T0096021-360-MGP_BALBcJ_P0096021117 (aa)--
Gene Model
Click here to download MGP_BALBcJ_G0035653's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0035653's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_BALBcJ_G0035653Smarca17245.247MGP_BALBcJ_G0025070Hells6547.410
MGP_BALBcJ_G0035653Smarca16132.031MGP_BALBcJ_G0028600Rad54l6633.267
MGP_BALBcJ_G0035653Smarca16831.488MGP_BALBcJ_G0028023Rad54b6631.229
MGP_BALBcJ_G0035653Smarca17130.332MGP_BALBcJ_G0020623Ercc6l28230.353
MGP_BALBcJ_G0035653Smarca17542.044MGP_BALBcJ_G0027613Chd1l6243.419

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