EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_BALBcJ_G0035654 (Gene tree)
Gene ID
-
Gene Symbol
Ocrl
Alias
9530014D17Rik|BB143339|OCRL1
Full Name
oculocerebrorenal syndrome of Lowe
Gene Type
protein_coding
Species
Mus_musculus_balbcj
Status
putative
Strand
Plus strand
Length
57436 bases
Position
chrX:42558177-42615612
Accession
109589
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_BALBcJ_P0096024Exo_endo_phosPF03372.233.3e-1511
MGP_BALBcJ_P0096027Exo_endo_phosPF03372.234e-1511
MGP_BALBcJ_P0096023Exo_endo_phosPF03372.234.2e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_BALBcJ_T0096023-5253XM_011251008MGP_BALBcJ_P0096023900 (aa)XP_011249310Q6NVF0
MGP_BALBcJ_T0096026-2839--- (aa)--
MGP_BALBcJ_T0096027-4953-MGP_BALBcJ_P0096027887 (aa)--
MGP_BALBcJ_T0096024-3210-MGP_BALBcJ_P0096024727 (aa)--
MGP_BALBcJ_T0096025-2930--- (aa)--
MGP_BALBcJ_T0096028-727--- (aa)--
MGP_BALBcJ_T0096029-799-MGP_BALBcJ_P0096029265 (aa)--
Gene Model
Click here to download MGP_BALBcJ_G0035654's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0035654's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_BALBcJ_G0035654Ocrl5032.039MGP_BALBcJ_G0023081Synj25832.653
MGP_BALBcJ_G0035654Ocrl8251.578MGP_BALBcJ_G0028735Inpp5b7151.748

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us