EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0036062 (Gene tree)
Gene ID: -
Gene Symbol: Nxf3
Alias: Gm384|LOC245610|NXF3
Full Name: nuclear RNA export factor 3
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 13402 bases
Position: chrX:131220149-131233550
Accession: 2685230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0097469	Tap-RNA_bind	PF09162.10	1.3e-31	1	1
MGP_BALBcJ_P0097470	Tap-RNA_bind	PF09162.10	7.8e-05	1	1
MGP_BALBcJ_P0097469	TAP_C	PF03943.13	1.1e-12	1	1
MGP_BALBcJ_P0097469	NTF2	PF02136.20	2.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0097470	-	561	-	MGP_BALBcJ_P0097470	103 (aa)	-	-
MGP_BALBcJ_T0097469	-	2978	XM_006528530	MGP_BALBcJ_P0097469	553 (aa)	XP_006528594	B1AUS0

Gene Model

Click here to download MGP_BALBcJ_G0036062's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0036062's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0036062	Nxf3	90	37.705	MGP_BALBcJ_G0036053	Nxf7	99	40.688
MGP_BALBcJ_G0036062	Nxf3	89	48.188	MGP_BALBcJ_G0036051	Nxf2	90	36.139
MGP_BALBcJ_G0036062	Nxf3	91	38.475	MGP_BALBcJ_G0024775	Nxf1	91	38.475