EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0015674 (Gene tree)
Gene ID: -
Gene Symbol: Rab23
Alias: AW545388|opb|opb2
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 24090 bases
Position: chr1:31877492-31901581
Accession: 99833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0018950	MMR_HSR1	PF01926.23	1.2e-05	1	1
MGP_C3HHeJ_P0018954	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0018948	-	444	-	-	- (aa)	-	-
MGP_C3HHeJ_T0018949	-	2557	-	-	- (aa)	-	-
MGP_C3HHeJ_T0018957	-	1764	-	-	- (aa)	-	-
MGP_C3HHeJ_T0018956	-	437	-	-	- (aa)	-	-
MGP_C3HHeJ_T0018955	-	1966	-	-	- (aa)	-	-
MGP_C3HHeJ_T0018954	-	4218	-	MGP_C3HHeJ_P0018954	237 (aa)	-	-
MGP_C3HHeJ_T0018953	-	1087	-	-	- (aa)	-	-
MGP_C3HHeJ_T0018952	-	2047	-	-	- (aa)	-	-
MGP_C3HHeJ_T0018951	-	4398	-	MGP_C3HHeJ_P0018951	64 (aa)	-	-
MGP_C3HHeJ_T0018950	-	4322	-	MGP_C3HHeJ_P0018950	237 (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0015674's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0015674's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0015674	Rab23	65	34.375	MGP_C3HHeJ_G0035937	Rab9	79	34.375
MGP_C3HHeJ_G0015674	Rab23	69	35.119	MGP_C3HHeJ_G0023711	Rab12	57	35.119
MGP_C3HHeJ_G0015674	Rab23	72	34.682	MGP_C3HHeJ_G0019609	Rab15	81	34.682
MGP_C3HHeJ_G0015674	Rab23	65	31.410	MGP_C3HHeJ_G0031183	Kras	94	32.778
MGP_C3HHeJ_G0015674	Rab23	70	34.337	MGP_C3HHeJ_G0025384	Rab14	88	35.338
MGP_C3HHeJ_G0015674	Rab23	67	31.765	MGP_C3HHeJ_G0030076	Rasl11a	69	31.765
MGP_C3HHeJ_G0015674	Rab23	67	35.152	MGP_C3HHeJ_G0026913	Rab33b	72	35.152
MGP_C3HHeJ_G0015674	Rab23	80	30.890	MGP_C3HHeJ_G0023702	Rab31	93	30.890
MGP_C3HHeJ_G0015674	Rab23	65	33.766	MGP_C3HHeJ_G0026677	Rab22a	79	33.766
MGP_C3HHeJ_G0015674	Rab23	80	32.984	MGP_C3HHeJ_G0023261	Rab11b	88	32.984
MGP_C3HHeJ_G0015674	Rab23	75	32.961	MGP_C3HHeJ_G0019120	Rab37	81	32.961
MGP_C3HHeJ_G0015674	Rab23	65	36.538	MGP_C3HHeJ_G0035541	Rab39b	73	36.538
MGP_C3HHeJ_G0015674	Rab23	61	31.507	MGP_C3HHeJ_G0032911	Hras	98	30.332
MGP_C3HHeJ_G0015674	Rab23	66	37.654	MGP_C3HHeJ_G0035785	Rab9b	80	37.654
MGP_C3HHeJ_G0015674	Rab23	61	32.192	MGP_C3HHeJ_G0027390	Nras	95	35.862
MGP_C3HHeJ_G0015674	Rab23	77	38.172	MGP_C3HHeJ_G0017111	Rab36	69	38.172
MGP_C3HHeJ_G0015674	Rab23	67	38.125	MGP_C3HHeJ_G0023612	Rab5a	74	38.125
MGP_C3HHeJ_G0015674	Rab23	65	36.129	MGP_C3HHeJ_G0029053	Rheb	84	36.129
MGP_C3HHeJ_G0015674	Rab23	86	32.850	MGP_C3HHeJ_G0021035	Rab2b	94	32.850
MGP_C3HHeJ_G0015674	Rab23	77	31.383	MGP_C3HHeJ_G0035367	Rab33a	79	31.383
MGP_C3HHeJ_G0015674	Rab23	66	41.139	MGP_C3HHeJ_G0034876	Rab6b	76	41.139
MGP_C3HHeJ_G0015674	Rab23	75	34.831	MGP_C3HHeJ_G0029670	Rab35	95	33.684
MGP_C3HHeJ_G0015674	Rab23	68	33.129	MGP_C3HHeJ_G0031289	Rasl2-9	74	33.129
MGP_C3HHeJ_G0015674	Rab23	80	32.984	MGP_C3HHeJ_G0034626	Rab11a	92	34.752
MGP_C3HHeJ_G0015674	Rab23	85	31.683	MGP_C3HHeJ_G0027115	Rab25	92	31.683
MGP_C3HHeJ_G0015674	Rab23	70	33.918	MGP_C3HHeJ_G0030726	Rab7	94	43.478
MGP_C3HHeJ_G0015674	Rab23	74	35.227	MGP_C3HHeJ_G0018918	Rab5c	81	35.227
MGP_C3HHeJ_G0015674	Rab23	67	37.500	MGP_C3HHeJ_G0017639	Rab5b	74	37.500
MGP_C3HHeJ_G0015674	Rab23	74	37.500	MGP_C3HHeJ_G0032214	Rab30	87	37.500
MGP_C3HHeJ_G0015674	Rab23	70	34.337	MGP_C3HHeJ_G0017819	Rab1a	81	34.337
MGP_C3HHeJ_G0015674	Rab23	72	35.465	MGP_C3HHeJ_G0023860	Rab18	83	35.465
MGP_C3HHeJ_G0015674	Rab23	66	39.873	MGP_C3HHeJ_G0032274	Rab6a	76	39.873
MGP_C3HHeJ_G0015674	Rab23	70	34.337	MGP_C3HHeJ_G0024427	Rab1b	83	34.337
MGP_C3HHeJ_G0015674	Rab23	64	38.462	MGP_C3HHeJ_G0018521	Rab34	60	38.462
MGP_C3HHeJ_G0015674	Rab23	83	32.487	MGP_C3HHeJ_G0027739	Rab2a	95	31.863