EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0016181 (Gene tree)
Gene ID: -
Gene Symbol: Ddx18
Alias: 2310005B10Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 16646 bases
Position: chr1:123615968-123632613
Accession: 1914192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0021538	ResIII	PF04851.15	1.4e-06	1	1
MGP_C3HHeJ_P0021538	DEAD	PF00270.29	6.5e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0021540	-	512	-	MGP_C3HHeJ_P0021540	170 (aa)	-	-
MGP_C3HHeJ_T0021539	-	622	-	-	- (aa)	-	-
MGP_C3HHeJ_T0021538	-	2258	XM_006529794	MGP_C3HHeJ_P0021538	660 (aa)	XP_006529857	Q8K363
MGP_C3HHeJ_T0021541	-	451	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0016181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0016181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0016181	Ddx18	55	38.251	MGP_C3HHeJ_G0031116	Ddx47	88	37.432
MGP_C3HHeJ_G0016181	Ddx18	68	35.983	MGP_C3HHeJ_G0029793	Ddx55	79	35.833
MGP_C3HHeJ_G0016181	Ddx18	57	34.097	MGP_C3HHeJ_G0017064	Ddx50	51	34.097
MGP_C3HHeJ_G0016181	Ddx18	53	32.888	MGP_C3HHeJ_G0016682	D1Pas1	56	32.888
MGP_C3HHeJ_G0016181	Ddx18	53	32.861	MGP_C3HHeJ_G0016310	Ddx59	55	32.861
MGP_C3HHeJ_G0016181	Ddx18	52	33.046	MGP_C3HHeJ_G0021815	Ddx17	53	33.046
MGP_C3HHeJ_G0016181	Ddx18	51	30.473	MGP_C3HHeJ_G0033525	Ddx39	81	30.028
MGP_C3HHeJ_G0016181	Ddx18	61	38.221	MGP_C3HHeJ_G0026624	Ddx27	53	37.981
MGP_C3HHeJ_G0016181	Ddx18	53	32.888	MGP_C3HHeJ_G0035258	Ddx3x	56	33.155
MGP_C3HHeJ_G0016181	Ddx18	55	32.990	MGP_C3HHeJ_G0018617	Ddx52	68	31.935
MGP_C3HHeJ_G0016181	Ddx18	50	32.836	MGP_C3HHeJ_G0019064	Ddx5	74	31.373
MGP_C3HHeJ_G0016181	Ddx18	65	36.128	MGP_C3HHeJ_G0025267	Ddx31	72	36.128
MGP_C3HHeJ_G0016181	Ddx18	66	46.014	MGP_C3HHeJ_G0034490	Ddx10	50	46.014
MGP_C3HHeJ_G0016181	Ddx18	56	35.884	MGP_C3HHeJ_G0033388	Ddx49	92	37.764
MGP_C3HHeJ_G0016181	Ddx18	64	32.071	MGP_C3HHeJ_G0029704	Ddx54	50	32.143
MGP_C3HHeJ_G0016181	Ddx18	50	33.819	MGP_C3HHeJ_G0020351	Ddx41	54	33.819
MGP_C3HHeJ_G0016181	Ddx18	56	34.715	MGP_C3HHeJ_G0034749	Ddx43	55	34.715
MGP_C3HHeJ_G0016181	Ddx18	50	30.366	MGP_C3HHeJ_G0029587	Ddx51	59	30.809