EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0017151 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp3
Alias: AlphaCP-3
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 195681 bases
Position: chr10:76447856-76643536
Accession: 1890470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0025609	KH_1	PF00013.29	2.9e-55	1	3
MGP_C3HHeJ_P0025609	KH_1	PF00013.29	2.9e-55	2	3
MGP_C3HHeJ_P0025609	KH_1	PF00013.29	2.9e-55	3	3
MGP_C3HHeJ_P0025606	KH_1	PF00013.29	3e-55	1	3
MGP_C3HHeJ_P0025606	KH_1	PF00013.29	3e-55	2	3
MGP_C3HHeJ_P0025606	KH_1	PF00013.29	3e-55	3	3
MGP_C3HHeJ_P0025608	KH_1	PF00013.29	3e-55	1	3
MGP_C3HHeJ_P0025608	KH_1	PF00013.29	3e-55	2	3
MGP_C3HHeJ_P0025608	KH_1	PF00013.29	3e-55	3	3
MGP_C3HHeJ_P0025611	KH_1	PF00013.29	7.7e-19	1	1
MGP_C3HHeJ_P0025609	KH_2	PF07650.17	3.9e-15	1	1
MGP_C3HHeJ_P0025606	KH_2	PF07650.17	3.9e-15	1	1
MGP_C3HHeJ_P0025608	KH_2	PF07650.17	3.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0025614	-	337	-	-	- (aa)	-	-
MGP_C3HHeJ_T0025609	-	2544	-	MGP_C3HHeJ_P0025609	370 (aa)	-	-
MGP_C3HHeJ_T0025608	-	1748	-	MGP_C3HHeJ_P0025608	371 (aa)	-	-
MGP_C3HHeJ_T0025607	-	1736	-	-	- (aa)	-	-
MGP_C3HHeJ_T0025606	-	2013	XM_006513916	MGP_C3HHeJ_P0025606	371 (aa)	XP_006513979	P57722
MGP_C3HHeJ_T0025610	-	1095	-	-	- (aa)	-	-
MGP_C3HHeJ_T0025611	-	605	-	MGP_C3HHeJ_P0025611	160 (aa)	-	-
MGP_C3HHeJ_T0025612	-	944	-	MGP_C3HHeJ_P0025612	226 (aa)	-	-
MGP_C3HHeJ_T0025613	-	717	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0017151's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0017151's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0017151	Pcbp3	99	65.873	MGP_C3HHeJ_G0030753	Pcbp1	99	66.484
MGP_C3HHeJ_G0017151	Pcbp3	99	82.143	MGP_C3HHeJ_G0022148	Pcbp2	99	78.338
MGP_C3HHeJ_G0017151	Pcbp3	86	35.000	MGP_C3HHeJ_G0030415	Igf2bp3	59	33.813
MGP_C3HHeJ_G0017151	Pcbp3	85	31.973	MGP_C3HHeJ_G0025321	Fubp3	77	31.973
MGP_C3HHeJ_G0017151	Pcbp3	79	41.667	MGP_C3HHeJ_G0020382	Hnrnpk	79	31.724
MGP_C3HHeJ_G0017151	Pcbp3	89	36.765	MGP_C3HHeJ_G0022397	Igf2bp2	62	33.333
MGP_C3HHeJ_G0017151	Pcbp3	66	31.250	MGP_C3HHeJ_G0027689	Fubp1	71	33.019
MGP_C3HHeJ_G0017151	Pcbp3	85	69.811	MGP_C3HHeJ_G0034915	-	93	70.652
MGP_C3HHeJ_G0017151	Pcbp3	66	33.582	MGP_C3HHeJ_G0018748	Igf2bp1	60	33.333
MGP_C3HHeJ_G0017151	Pcbp3	72	40.351	MGP_C3HHeJ_G0019460	Nova1	59	40.351