EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0025953	RRM_1	PF00076.22	5e-26	1	1
MGP_C3HHeJ_P0025955	RRM_1	PF00076.22	1.2e-25	1	1
MGP_C3HHeJ_P0025954	RRM_1	PF00076.22	1.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0025957	-	912	-	-	- (aa)	-	-
MGP_C3HHeJ_T0025956	-	376	-	-	- (aa)	-	-
MGP_C3HHeJ_T0025955	-	834	-	MGP_C3HHeJ_P0025955	168 (aa)	-	-
MGP_C3HHeJ_T0025954	-	1321	-	MGP_C3HHeJ_P0025954	172 (aa)	-	-
MGP_C3HHeJ_T0025953	-	423	XM_006513164	MGP_C3HHeJ_P0025953	108 (aa)	XP_006513227	P60824
MGP_C3HHeJ_T0025959	-	593	-	-	- (aa)	-	-
MGP_C3HHeJ_T0025958	-	894	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0017249	Cirbp	88	43.243	MGP_C3HHeJ_G0018679	Msi2	61	41.429
MGP_C3HHeJ_G0017249	Cirbp	92	42.105	MGP_C3HHeJ_G0017255	Dazap1	74	47.273
MGP_C3HHeJ_G0017249	Cirbp	83	38.776	MGP_C3HHeJ_G0029479	Hnrnpd	84	36.559
MGP_C3HHeJ_G0017249	Cirbp	73	36.709	MGP_C3HHeJ_G0029481	Hnrnpdl	54	36.709
MGP_C3HHeJ_G0017249	Cirbp	80	32.558	MGP_C3HHeJ_G0025065	Celf2	82	33.333
MGP_C3HHeJ_G0017249	Cirbp	85	38.043	MGP_C3HHeJ_G0022457	Ncbp2	54	36.471
MGP_C3HHeJ_G0017249	Cirbp	85	40.244	MGP_C3HHeJ_G0032780	Tial1	67	40.244
MGP_C3HHeJ_G0017249	Cirbp	79	62.353	MGP_C3HHeJ_G0033491	-	57	54.545
MGP_C3HHeJ_G0017249	Cirbp	94	38.614	MGP_C3HHeJ_G0020376	Hnrnpa0	56	43.421
MGP_C3HHeJ_G0017249	Cirbp	84	38.889	MGP_C3HHeJ_G0028272	Elavl4	70	38.889
MGP_C3HHeJ_G0017249	Cirbp	70	44.737	MGP_C3HHeJ_G0030429	Hnrnpa2b1	50	44.737
MGP_C3HHeJ_G0017249	Cirbp	79	63.529	MGP_C3HHeJ_G0035420	Rbmx	83	63.529
MGP_C3HHeJ_G0017249	Cirbp	98	60.714	MGP_C3HHeJ_G0035223	Rbm3	90	70.370
MGP_C3HHeJ_G0017249	Cirbp	78	40.476	MGP_C3HHeJ_G0026670	Rbm38	74	38.043
MGP_C3HHeJ_G0017249	Cirbp	68	34.247	MGP_C3HHeJ_G0021140	Pspc1	69	41.304
MGP_C3HHeJ_G0017249	Cirbp	84	31.868	MGP_C3HHeJ_G0026530	Srsf6	61	31.868
MGP_C3HHeJ_G0017249	Cirbp	79	37.500	MGP_C3HHeJ_G0034155	Elavl3	62	37.500
MGP_C3HHeJ_G0017249	Cirbp	91	35.714	MGP_C3HHeJ_G0030756	Tia1	80	37.778
MGP_C3HHeJ_G0017249	Cirbp	87	40.351	MGP_C3HHeJ_G0029664	Msi1	51	38.983
MGP_C3HHeJ_G0017249	Cirbp	76	37.500	MGP_C3HHeJ_G0028138	Elavl2	64	37.500
MGP_C3HHeJ_G0017249	Cirbp	82	33.333	MGP_C3HHeJ_G0033028	Elavl1	75	33.333
MGP_C3HHeJ_G0017249	Cirbp	91	39.759	MGP_C3HHeJ_G0026551	Pabpc1l	53	39.759