EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0017639 (Gene tree)
Gene ID: -
Gene Symbol: Rab5b
Alias: C030027M18Rik
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 23139 bases
Position: chr10:131010083-131033221
Accession: 105938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0027292	MMR_HSR1	PF01926.23	0.00026	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0027292	-	3223	XM_006513384	MGP_C3HHeJ_P0027292	215 (aa)	XP_006513447	P61021

Gene Model

Click here to download MGP_C3HHeJ_G0017639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0017639's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0017639	Rab5b	62	30.986	MGP_C3HHeJ_G0030626	Arl8b	73	30.986
MGP_C3HHeJ_G0017639	Rab5b	90	37.949	MGP_C3HHeJ_G0029670	Rab35	96	37.949
MGP_C3HHeJ_G0017639	Rab5b	91	37.949	MGP_C3HHeJ_G0027739	Rab2a	76	43.478
MGP_C3HHeJ_G0017639	Rab5b	75	44.720	MGP_C3HHeJ_G0025384	Rab14	89	41.481
MGP_C3HHeJ_G0017639	Rab5b	77	45.181	MGP_C3HHeJ_G0032274	Rab6a	80	45.181
MGP_C3HHeJ_G0017639	Rab5b	100	81.860	MGP_C3HHeJ_G0023612	Rab5a	100	81.860
MGP_C3HHeJ_G0017639	Rab5b	90	47.938	MGP_C3HHeJ_G0026677	Rab22a	98	47.938
MGP_C3HHeJ_G0017639	Rab5b	90	38.462	MGP_C3HHeJ_G0023860	Rab18	93	38.462
MGP_C3HHeJ_G0017639	Rab5b	80	33.333	MGP_C3HHeJ_G0031289	Rasl2-9	76	33.333
MGP_C3HHeJ_G0017639	Rab5b	78	35.882	MGP_C3HHeJ_G0035541	Rab39b	80	35.882
MGP_C3HHeJ_G0017639	Rab5b	90	35.323	MGP_C3HHeJ_G0035785	Rab9b	97	35.323
MGP_C3HHeJ_G0017639	Rab5b	74	37.500	MGP_C3HHeJ_G0015674	Rab23	67	37.500
MGP_C3HHeJ_G0017639	Rab5b	75	47.205	MGP_C3HHeJ_G0034626	Rab11a	88	48.889
MGP_C3HHeJ_G0017639	Rab5b	90	43.367	MGP_C3HHeJ_G0017819	Rab1a	95	43.367
MGP_C3HHeJ_G0017639	Rab5b	82	39.344	MGP_C3HHeJ_G0026913	Rab33b	79	39.130
MGP_C3HHeJ_G0017639	Rab5b	90	43.627	MGP_C3HHeJ_G0023261	Rab11b	94	43.627
MGP_C3HHeJ_G0017639	Rab5b	83	37.705	MGP_C3HHeJ_G0035367	Rab33a	77	37.705
MGP_C3HHeJ_G0017639	Rab5b	75	45.963	MGP_C3HHeJ_G0027115	Rab25	76	45.963
MGP_C3HHeJ_G0017639	Rab5b	86	40.761	MGP_C3HHeJ_G0021035	Rab2b	85	40.761
MGP_C3HHeJ_G0017639	Rab5b	91	47.959	MGP_C3HHeJ_G0023702	Rab31	98	47.959
MGP_C3HHeJ_G0017639	Rab5b	78	42.857	MGP_C3HHeJ_G0032214	Rab30	83	42.857
MGP_C3HHeJ_G0017639	Rab5b	93	35.294	MGP_C3HHeJ_G0035937	Rab9	99	35.294
MGP_C3HHeJ_G0017639	Rab5b	82	45.198	MGP_C3HHeJ_G0024427	Rab1b	87	45.198
MGP_C3HHeJ_G0017639	Rab5b	84	30.220	MGP_C3HHeJ_G0027390	Nras	99	33.333
MGP_C3HHeJ_G0017639	Rab5b	97	86.124	MGP_C3HHeJ_G0018918	Rab5c	97	86.124
MGP_C3HHeJ_G0017639	Rab5b	85	35.326	MGP_C3HHeJ_G0023711	Rab12	63	35.326
MGP_C3HHeJ_G0017639	Rab5b	73	35.000	MGP_C3HHeJ_G0017111	Rab36	60	35.000
MGP_C3HHeJ_G0017639	Rab5b	94	41.827	MGP_C3HHeJ_G0019120	Rab37	93	41.827
MGP_C3HHeJ_G0017639	Rab5b	77	45.783	MGP_C3HHeJ_G0034876	Rab6b	80	45.783
MGP_C3HHeJ_G0017639	Rab5b	77	32.335	MGP_C3HHeJ_G0031183	Kras	88	32.335
MGP_C3HHeJ_G0017639	Rab5b	55	30.159	MGP_C3HHeJ_G0019447	Arl4a	60	30.159
MGP_C3HHeJ_G0017639	Rab5b	82	36.932	MGP_C3HHeJ_G0019609	Rab15	83	36.932
MGP_C3HHeJ_G0017639	Rab5b	82	33.333	MGP_C3HHeJ_G0029053	Rheb	93	33.333
MGP_C3HHeJ_G0017639	Rab5b	82	32.787	MGP_C3HHeJ_G0032911	Hras	96	32.787
MGP_C3HHeJ_G0017639	Rab5b	62	30.986	MGP_C3HHeJ_G0016286	Arl8a	73	30.986
MGP_C3HHeJ_G0017639	Rab5b	74	37.195	MGP_C3HHeJ_G0021976	Rabl2	72	37.195
MGP_C3HHeJ_G0017639	Rab5b	77	42.941	MGP_C3HHeJ_G0030726	Rab7	90	47.727