EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0017819 (Gene tree)
Gene ID: -
Gene Symbol: Rab1a
Alias: ECO:0000313|MGI:MGI:97842},GN Rab1A|Gtbp|Rab-1|Rab1|Rab1 {ECO:0000313|EMBL:EDL07829.1,GN ECO:0000313|Ensembl:ENSMUSP00000127330|Ypt1|mKIAA3012|ras-related YPT1 protein
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 25202 bases
Position: chr11:17617626-17642827
Accession: 97842
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0027912	MMR_HSR1	PF01926.23	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0027911	-	702	-	-	- (aa)	-	-
MGP_C3HHeJ_T0027910	-	962	-	-	- (aa)	-	-
MGP_C3HHeJ_T0027912	-	2587	-	MGP_C3HHeJ_P0027912	205 (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0017819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0017819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0017819	Rab1a	80	50.909	MGP_C3HHeJ_G0019609	Rab15	78	50.909
MGP_C3HHeJ_G0017819	Rab1a	62	31.061	MGP_C3HHeJ_G0027011	Arl14	65	31.061
MGP_C3HHeJ_G0017819	Rab1a	97	46.465	MGP_C3HHeJ_G0021035	Rab2b	92	46.465
MGP_C3HHeJ_G0017819	Rab1a	57	31.933	MGP_C3HHeJ_G0019447	Arl4a	59	31.933
MGP_C3HHeJ_G0017819	Rab1a	84	35.028	MGP_C3HHeJ_G0032911	Hras	93	35.028
MGP_C3HHeJ_G0017819	Rab1a	90	48.108	MGP_C3HHeJ_G0027739	Rab2a	99	45.238
MGP_C3HHeJ_G0017819	Rab1a	80	36.527	MGP_C3HHeJ_G0034853	Mras	80	36.527
MGP_C3HHeJ_G0017819	Rab1a	94	45.361	MGP_C3HHeJ_G0023860	Rab18	93	45.361
MGP_C3HHeJ_G0017819	Rab1a	95	43.814	MGP_C3HHeJ_G0023612	Rab5a	90	43.814
MGP_C3HHeJ_G0017819	Rab1a	95	43.590	MGP_C3HHeJ_G0018918	Rab5c	89	43.590
MGP_C3HHeJ_G0017819	Rab1a	95	38.660	MGP_C3HHeJ_G0026677	Rab22a	97	38.660
MGP_C3HHeJ_G0017819	Rab1a	81	45.238	MGP_C3HHeJ_G0019120	Rab37	78	45.238
MGP_C3HHeJ_G0017819	Rab1a	68	30.496	MGP_C3HHeJ_G0024942	Arl3	72	30.496
MGP_C3HHeJ_G0017819	Rab1a	95	33.175	MGP_C3HHeJ_G0017111	Rab36	79	33.175
MGP_C3HHeJ_G0017819	Rab1a	80	38.415	MGP_C3HHeJ_G0031183	Kras	97	35.676
MGP_C3HHeJ_G0017819	Rab1a	77	40.491	MGP_C3HHeJ_G0018521	Rab34	62	40.491
MGP_C3HHeJ_G0017819	Rab1a	57	33.058	MGP_C3HHeJ_G0024485	Arl2	61	33.058
MGP_C3HHeJ_G0017819	Rab1a	82	45.833	MGP_C3HHeJ_G0027115	Rab25	79	45.833
MGP_C3HHeJ_G0017819	Rab1a	94	38.384	MGP_C3HHeJ_G0032274	Rab6a	94	38.384
MGP_C3HHeJ_G0017819	Rab1a	90	39.785	MGP_C3HHeJ_G0023702	Rab31	95	39.785
MGP_C3HHeJ_G0017819	Rab1a	76	38.994	MGP_C3HHeJ_G0035937	Rab9	79	38.994
MGP_C3HHeJ_G0017819	Rab1a	99	92.079	MGP_C3HHeJ_G0024427	Rab1b	100	92.079
MGP_C3HHeJ_G0017819	Rab1a	82	32.544	MGP_C3HHeJ_G0029053	Rheb	91	32.544
MGP_C3HHeJ_G0017819	Rab1a	100	45.116	MGP_C3HHeJ_G0023261	Rab11b	99	45.116
MGP_C3HHeJ_G0017819	Rab1a	57	32.203	MGP_C3HHeJ_G0030626	Arl8b	61	32.203
MGP_C3HHeJ_G0017819	Rab1a	76	38.994	MGP_C3HHeJ_G0035785	Rab9b	79	38.994
MGP_C3HHeJ_G0017819	Rab1a	81	38.235	MGP_C3HHeJ_G0030726	Rab7	98	39.583
MGP_C3HHeJ_G0017819	Rab1a	99	44.554	MGP_C3HHeJ_G0025384	Rab14	97	47.619
MGP_C3HHeJ_G0017819	Rab1a	94	36.410	MGP_C3HHeJ_G0034876	Rab6b	94	36.410
MGP_C3HHeJ_G0017819	Rab1a	69	30.201	MGP_C3HHeJ_G0018961	Arl4d	73	30.201
MGP_C3HHeJ_G0017819	Rab1a	80	38.415	MGP_C3HHeJ_G0027390	Nras	96	39.041
MGP_C3HHeJ_G0017819	Rab1a	75	37.580	MGP_C3HHeJ_G0021976	Rabl2	67	37.580
MGP_C3HHeJ_G0017819	Rab1a	94	43.434	MGP_C3HHeJ_G0035367	Rab33a	83	43.434
MGP_C3HHeJ_G0017819	Rab1a	86	43.820	MGP_C3HHeJ_G0035541	Rab39b	84	43.820
MGP_C3HHeJ_G0017819	Rab1a	81	34.337	MGP_C3HHeJ_G0015674	Rab23	70	34.337
MGP_C3HHeJ_G0017819	Rab1a	83	43.429	MGP_C3HHeJ_G0026913	Rab33b	76	43.429
MGP_C3HHeJ_G0017819	Rab1a	99	53.960	MGP_C3HHeJ_G0029670	Rab35	100	53.960
MGP_C3HHeJ_G0017819	Rab1a	95	43.367	MGP_C3HHeJ_G0017639	Rab5b	90	43.367
MGP_C3HHeJ_G0017819	Rab1a	79	31.902	MGP_C3HHeJ_G0031289	Rasl2-9	73	31.902
MGP_C3HHeJ_G0017819	Rab1a	85	52.299	MGP_C3HHeJ_G0034626	Rab11a	100	50.000
MGP_C3HHeJ_G0017819	Rab1a	82	50.296	MGP_C3HHeJ_G0023711	Rab12	58	50.296
MGP_C3HHeJ_G0017819	Rab1a	58	34.454	MGP_C3HHeJ_G0016286	Arl8a	62	34.454
MGP_C3HHeJ_G0017819	Rab1a	81	50.602	MGP_C3HHeJ_G0032214	Rab30	82	50.602
MGP_C3HHeJ_G0017819	Rab1a	57	31.092	MGP_C3HHeJ_G0016054	Arl4c	61	31.092