EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0017963 (Gene tree)
Gene ID: -
Gene Symbol: Gm12185
Alias: OTTMUSG00000005523|RP23-14F5.8
Full Name: predicted gene 12185
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 28680 bases
Position: chr11:47478836-47507515
Accession: 3652173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0028486	MMR_HSR1	PF01926.23	5.6e-17	1	2
MGP_C3HHeJ_P0028486	MMR_HSR1	PF01926.23	5.6e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0028486	-	4617	-	MGP_C3HHeJ_P0028486	659 (aa)	-	Q5NCB2
MGP_C3HHeJ_T0028488	-	333	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0017963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0017963's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0017963	Gm12185	70	37.037	MGP_C3HHeJ_G0018097	Igtp	57	37.156
MGP_C3HHeJ_G0017963	Gm12185	80	36.071	MGP_C3HHeJ_G0018098	Irgm2	68	36.364
MGP_C3HHeJ_G0017963	Gm12185	89	52.013	MGP_C3HHeJ_G0024194	Iigp1	77	52.797
MGP_C3HHeJ_G0017963	Gm12185	88	48.185	MGP_C3HHeJ_G0024191	Gm4951	76	49.648
MGP_C3HHeJ_G0017963	Gm12185	87	49.007	MGP_C3HHeJ_G0024192	Gm4841	70	49.306
MGP_C3HHeJ_G0017963	Gm12185	89	54.515	MGP_C3HHeJ_G0024193	F830016B08Rik	76	54.895
MGP_C3HHeJ_G0017963	Gm12185	80	38.889	MGP_C3HHeJ_G0017961	Irgm1	86	38.554
MGP_C3HHeJ_G0017963	Gm12185	84	48.443	MGP_C3HHeJ_G0017969	Ifi47	68	48.772
MGP_C3HHeJ_G0017963	Gm12185	89	100.000	MGP_C3HHeJ_G0017964	-	99	100.000
MGP_C3HHeJ_G0017963	Gm12185	86	69.463	MGP_C3HHeJ_G0017967	-	70	69.686
MGP_C3HHeJ_G0017963	Gm12185	86	69.463	MGP_C3HHeJ_G0017968	-	70	69.686
MGP_C3HHeJ_G0017963	Gm12185	82	39.777	MGP_C3HHeJ_G0031533	Irgc1	59	39.777