EuRBPDB

Description

Ensembl ID: MGP_C3HHeJ_G0018000 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnph1
Alias: AI642080|E430005G16Rik|Hnrnph|Hnrph|Hnrph1|Hnrph1 {ECO:0000313|EMBL:AAH42187.2,GN ECO:0000313|MGI:MGI:1891925}
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 9796 bases
Position: chr11:49170222-49180017
Accession: 1891925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0028606	zf-RNPHF	PF08080.12	1.3e-22	1	1
MGP_C3HHeJ_P0028607	zf-RNPHF	PF08080.12	1.3e-22	1	1
MGP_C3HHeJ_P0028612	zf-RNPHF	PF08080.12	1.5e-22	1	1
MGP_C3HHeJ_P0028606	RRM_1	PF00076.22	2e-32	1	3
MGP_C3HHeJ_P0028606	RRM_1	PF00076.22	2e-32	2	3
MGP_C3HHeJ_P0028606	RRM_1	PF00076.22	2e-32	3	3
MGP_C3HHeJ_P0028607	RRM_1	PF00076.22	2e-32	1	3
MGP_C3HHeJ_P0028607	RRM_1	PF00076.22	2e-32	2	3
MGP_C3HHeJ_P0028607	RRM_1	PF00076.22	2e-32	3	3
MGP_C3HHeJ_P0028612	RRM_1	PF00076.22	2.5e-32	1	3
MGP_C3HHeJ_P0028612	RRM_1	PF00076.22	2.5e-32	2	3
MGP_C3HHeJ_P0028612	RRM_1	PF00076.22	2.5e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0028620	-	163	-	-	- (aa)	-	-
MGP_C3HHeJ_T0028616	-	1724	-	-	- (aa)	-	-
MGP_C3HHeJ_T0028622	-	816	-	-	- (aa)	-	-
MGP_C3HHeJ_T0028615	-	582	-	-	- (aa)	-	-
MGP_C3HHeJ_T0028623	-	677	-	-	- (aa)	-	-
MGP_C3HHeJ_T0028617	-	832	-	-	- (aa)	-	-
MGP_C3HHeJ_T0028614	-	860	-	-	- (aa)	-	-
MGP_C3HHeJ_T0028606	-	2427	XM_006533875	MGP_C3HHeJ_P0028606	449 (aa)	XP_006533938	O35737
MGP_C3HHeJ_T0028607	-	2225	-	MGP_C3HHeJ_P0028607	449 (aa)	-	-
MGP_C3HHeJ_T0028613	-	1116	-	-	- (aa)	-	-
MGP_C3HHeJ_T0028612	-	2126	-	MGP_C3HHeJ_P0028612	472 (aa)	-	-
MGP_C3HHeJ_T0028611	-	870	-	-	- (aa)	-	-
MGP_C3HHeJ_T0028610	-	4002	-	-	- (aa)	-	-
MGP_C3HHeJ_T0028621	-	159	-	-	- (aa)	-	-
MGP_C3HHeJ_T0028608	-	4577	-	-	- (aa)	-	-
MGP_C3HHeJ_T0028609	-	581	-	-	- (aa)	-	-
MGP_C3HHeJ_T0028619	-	914	-	-	- (aa)	-	-
MGP_C3HHeJ_T0028618	-	582	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0018000	Hnrnph1	58	94.972	MGP_C3HHeJ_G0035749	-	80	94.972
MGP_C3HHeJ_G0018000	Hnrnph1	90	60.923	MGP_C3HHeJ_G0017071	Hnrnph3	99	59.673
MGP_C3HHeJ_G0018000	Hnrnph1	60	64.474	MGP_C3HHeJ_G0029410	Grsf1	92	65.333
MGP_C3HHeJ_G0018000	Hnrnph1	78	33.333	MGP_C3HHeJ_G0027761	-	73	33.333
MGP_C3HHeJ_G0018000	Hnrnph1	78	33.333	MGP_C3HHeJ_G0027760	Rbm12b1	52	33.333