EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0018006 (Gene tree)
Gene ID: -
Gene Symbol: Zfp454
Alias: B230342N19
Full Name: zinc finger protein 454
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 14645 bases
Position: chr11:49672090-49686734
Accession: 2679253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0028641	zf-C2H2	PF00096.26	7.7e-63	1	11
MGP_C3HHeJ_P0028641	zf-C2H2	PF00096.26	7.7e-63	2	11
MGP_C3HHeJ_P0028641	zf-C2H2	PF00096.26	7.7e-63	3	11
MGP_C3HHeJ_P0028641	zf-C2H2	PF00096.26	7.7e-63	4	11
MGP_C3HHeJ_P0028641	zf-C2H2	PF00096.26	7.7e-63	5	11
MGP_C3HHeJ_P0028641	zf-C2H2	PF00096.26	7.7e-63	6	11
MGP_C3HHeJ_P0028641	zf-C2H2	PF00096.26	7.7e-63	7	11
MGP_C3HHeJ_P0028641	zf-C2H2	PF00096.26	7.7e-63	8	11
MGP_C3HHeJ_P0028641	zf-C2H2	PF00096.26	7.7e-63	9	11
MGP_C3HHeJ_P0028641	zf-C2H2	PF00096.26	7.7e-63	10	11
MGP_C3HHeJ_P0028641	zf-C2H2	PF00096.26	7.7e-63	11	11
MGP_C3HHeJ_P0028641	zf-met	PF12874.7	0.00059	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0028641	-	1845	XM_006533208	MGP_C3HHeJ_P0028641	536 (aa)	XP_006533271	Q5NCH5
MGP_C3HHeJ_T0028642	-	579	-	-	- (aa)	-	-
MGP_C3HHeJ_T0028643	-	722	-	MGP_C3HHeJ_P0028643	122 (aa)	-	-
MGP_C3HHeJ_T0028644	-	606	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0018006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0018006's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0018006	Zfp454	75	42.982	MGP_C3HHeJ_G0024336	Zfp236	63	42.697
MGP_C3HHeJ_G0018006	Zfp454	68	45.745	MGP_C3HHeJ_G0026648	Zfp64	73	35.125
MGP_C3HHeJ_G0018006	Zfp454	71	57.803	MGP_C3HHeJ_G0031693	Zfp420	98	59.532
MGP_C3HHeJ_G0018006	Zfp454	86	49.080	MGP_C3HHeJ_G0020445	Rslcan18	87	49.080
MGP_C3HHeJ_G0018006	Zfp454	98	52.692	MGP_C3HHeJ_G0020446	Zfp759	100	52.692
MGP_C3HHeJ_G0018006	Zfp454	99	45.822	MGP_C3HHeJ_G0022976	Zfp945	99	46.197
MGP_C3HHeJ_G0018006	Zfp454	98	48.828	MGP_C3HHeJ_G0033828	Zfp1	99	48.828
MGP_C3HHeJ_G0018006	Zfp454	98	46.667	MGP_C3HHeJ_G0034162	Zfp872	99	46.667
MGP_C3HHeJ_G0018006	Zfp454	65	42.424	MGP_C3HHeJ_G0028746	Zbtb17	55	43.322
MGP_C3HHeJ_G0018006	Zfp454	65	47.423	MGP_C3HHeJ_G0029207	Zbtb49	63	50.000
MGP_C3HHeJ_G0018006	Zfp454	68	38.571	MGP_C3HHeJ_G0030900	Prdm5	78	38.571
MGP_C3HHeJ_G0018006	Zfp454	70	35.714	MGP_C3HHeJ_G0031558	Zfp574	88	37.500
MGP_C3HHeJ_G0018006	Zfp454	98	41.509	MGP_C3HHeJ_G0033454	Zfp882	99	44.110
MGP_C3HHeJ_G0018006	Zfp454	70	41.854	MGP_C3HHeJ_G0022983	Zscan10	75	44.554
MGP_C3HHeJ_G0018006	Zfp454	69	37.600	MGP_C3HHeJ_G0033668	Zfp319	91	37.989
MGP_C3HHeJ_G0018006	Zfp454	68	38.320	MGP_C3HHeJ_G0018101	Zfp672	90	42.029
MGP_C3HHeJ_G0018006	Zfp454	98	49.008	MGP_C3HHeJ_G0031521	Zfp112	72	57.143
MGP_C3HHeJ_G0018006	Zfp454	65	36.493	MGP_C3HHeJ_G0031282	Zfp784	71	36.493
MGP_C3HHeJ_G0018006	Zfp454	98	50.142	MGP_C3HHeJ_G0020463	Zfp748	100	50.142
MGP_C3HHeJ_G0018006	Zfp454	98	48.406	MGP_C3HHeJ_G0018152	Zfp867	82	49.583
MGP_C3HHeJ_G0018006	Zfp454	100	55.405	MGP_C3HHeJ_G0026182	Zfp661	98	55.405
MGP_C3HHeJ_G0018006	Zfp454	98	43.782	MGP_C3HHeJ_G0026610	Zfp334	99	44.615
MGP_C3HHeJ_G0018006	Zfp454	70	53.535	MGP_C3HHeJ_G0020023	Zkscan4	52	53.535
MGP_C3HHeJ_G0018006	Zfp454	87	48.199	MGP_C3HHeJ_G0031823	Zfp715	61	57.778
MGP_C3HHeJ_G0018006	Zfp454	69	60.345	MGP_C3HHeJ_G0030551	Zfp637	80	55.208
MGP_C3HHeJ_G0018006	Zfp454	82	58.140	MGP_C3HHeJ_G0031522	Zfp235	78	58.140
MGP_C3HHeJ_G0018006	Zfp454	98	50.836	MGP_C3HHeJ_G0031526	Zfp108	99	50.836
MGP_C3HHeJ_G0018006	Zfp454	76	53.448	MGP_C3HHeJ_G0031527	Zfp61	59	66.667
MGP_C3HHeJ_G0018006	Zfp454	98	50.523	MGP_C3HHeJ_G0031528	Zfp94	97	50.523
MGP_C3HHeJ_G0018006	Zfp454	99	49.485	MGP_C3HHeJ_G0022953	Zfp677	99	49.315
MGP_C3HHeJ_G0018006	Zfp454	100	49.851	MGP_C3HHeJ_G0022955	Zfp51	95	60.714
MGP_C3HHeJ_G0018006	Zfp454	99	53.604	MGP_C3HHeJ_G0021752	Zfp251	95	51.948
MGP_C3HHeJ_G0018006	Zfp454	69	39.130	MGP_C3HHeJ_G0018742	Zfp652	56	38.596
MGP_C3HHeJ_G0018006	Zfp454	67	42.623	MGP_C3HHeJ_G0031279	Zfp865	80	36.486
MGP_C3HHeJ_G0018006	Zfp454	68	42.262	MGP_C3HHeJ_G0029542	Gfi1	100	45.794
MGP_C3HHeJ_G0018006	Zfp454	99	50.565	MGP_C3HHeJ_G0031815	-	66	55.556
MGP_C3HHeJ_G0018006	Zfp454	82	36.599	MGP_C3HHeJ_G0030394	Repin1	92	35.252
MGP_C3HHeJ_G0018006	Zfp454	68	51.095	MGP_C3HHeJ_G0032730	Zfp768	51	50.523
MGP_C3HHeJ_G0018006	Zfp454	99	44.019	MGP_C3HHeJ_G0032732	E430018J23Rik	89	45.385
MGP_C3HHeJ_G0018006	Zfp454	70	47.410	MGP_C3HHeJ_G0032733	-	82	47.410
MGP_C3HHeJ_G0018006	Zfp454	70	50.645	MGP_C3HHeJ_G0031632	Zfp974	90	49.858