EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0018617 (Gene tree)
Gene ID: -
Gene Symbol: Ddx52
Alias: 2700029C06Rik|ROK1|Rok1
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 21896 bases
Position: chr11:84566206-84588101
Accession: 1925644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0031045	ResIII	PF04851.15	9.8e-06	1	1
MGP_C3HHeJ_P0031045	DEAD	PF00270.29	5.4e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0031045	-	3194	-	MGP_C3HHeJ_P0031045	598 (aa)	-	Q8K301
MGP_C3HHeJ_T0031046	-	553	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0018617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0018617's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0018617	Ddx52	58	33.428	MGP_C3HHeJ_G0031116	Ddx47	83	32.011
MGP_C3HHeJ_G0018617	Ddx52	61	30.081	MGP_C3HHeJ_G0033388	Ddx49	76	30.081
MGP_C3HHeJ_G0018617	Ddx52	68	30.733	MGP_C3HHeJ_G0020351	Ddx41	65	31.026
MGP_C3HHeJ_G0018617	Ddx52	60	41.071	MGP_C3HHeJ_G0019353	Ddx1	55	41.071
MGP_C3HHeJ_G0018617	Ddx52	58	30.900	MGP_C3HHeJ_G0029587	Ddx51	64	30.900
MGP_C3HHeJ_G0018617	Ddx52	66	34.069	MGP_C3HHeJ_G0020677	Ddx4	57	34.069
MGP_C3HHeJ_G0018617	Ddx52	70	30.222	MGP_C3HHeJ_G0022038	Ddx23	54	30.243
MGP_C3HHeJ_G0018617	Ddx52	60	32.044	MGP_C3HHeJ_G0022409	Eif4a2	90	30.240
MGP_C3HHeJ_G0018617	Ddx52	62	30.750	MGP_C3HHeJ_G0029793	Ddx55	63	30.750
MGP_C3HHeJ_G0018617	Ddx52	68	31.935	MGP_C3HHeJ_G0016181	Ddx18	55	32.990
MGP_C3HHeJ_G0018617	Ddx52	73	32.648	MGP_C3HHeJ_G0016310	Ddx59	64	33.741
MGP_C3HHeJ_G0018617	Ddx52	66	32.530	MGP_C3HHeJ_G0016682	D1Pas1	61	32.530
MGP_C3HHeJ_G0018617	Ddx52	68	30.456	MGP_C3HHeJ_G0021815	Ddx17	62	30.843
MGP_C3HHeJ_G0018617	Ddx52	64	31.714	MGP_C3HHeJ_G0019064	Ddx5	62	35.345
MGP_C3HHeJ_G0018617	Ddx52	69	34.135	MGP_C3HHeJ_G0034749	Ddx43	63	34.135
MGP_C3HHeJ_G0018617	Ddx52	70	32.045	MGP_C3HHeJ_G0035258	Ddx3x	61	32.530
MGP_C3HHeJ_G0018617	Ddx52	61	30.597	MGP_C3HHeJ_G0017772	Ddx56	80	33.493