EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0018660 (Gene tree)
Gene ID: -
Gene Symbol: Sept4
Alias: ARTS|Bh5|OTTMUSG00000001265|Pnutl2|cell division control-related protein 2b|septin H5
Full Name: septin 4
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 23468 bases
Position: chr11:88357201-88380668
Accession: 1270156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0031241	MMR_HSR1	PF01926.23	3.9e-07	1	1
MGP_C3HHeJ_P0031236	MMR_HSR1	PF01926.23	6.3e-07	1	1
MGP_C3HHeJ_P0031247	MMR_HSR1	PF01926.23	6.8e-07	1	1
MGP_C3HHeJ_P0031244	MMR_HSR1	PF01926.23	7.9e-07	1	1
MGP_C3HHeJ_P0031234	MMR_HSR1	PF01926.23	1.2e-06	1	1
MGP_C3HHeJ_P0031243	MMR_HSR1	PF01926.23	1.3e-06	1	1
MGP_C3HHeJ_P0031242	MMR_HSR1	PF01926.23	1.3e-06	1	1
MGP_C3HHeJ_P0031233	MMR_HSR1	PF01926.23	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0031239	-	1449	-	-	- (aa)	-	-
MGP_C3HHeJ_T0031238	-	1474	-	-	- (aa)	-	-
MGP_C3HHeJ_T0031233	-	666	XM_006532496	MGP_C3HHeJ_P0031233	213 (aa)	XP_006532559	P28661
MGP_C3HHeJ_T0031250	-	845	-	-	- (aa)	-	-
MGP_C3HHeJ_T0031237	-	1884	-	-	- (aa)	-	-
MGP_C3HHeJ_T0031236	-	1303	-	MGP_C3HHeJ_P0031236	313 (aa)	-	-
MGP_C3HHeJ_T0031235	-	900	-	-	- (aa)	-	-
MGP_C3HHeJ_T0031234	-	1678	-	MGP_C3HHeJ_P0031234	459 (aa)	-	-
MGP_C3HHeJ_T0031251	-	535	-	-	- (aa)	-	-
MGP_C3HHeJ_T0031248	-	560	-	-	- (aa)	-	-
MGP_C3HHeJ_T0031249	-	1019	-	MGP_C3HHeJ_P0031249	282 (aa)	-	-
MGP_C3HHeJ_T0031246	-	2136	-	-	- (aa)	-	-
MGP_C3HHeJ_T0031247	-	878	-	MGP_C3HHeJ_P0031247	280 (aa)	-	-
MGP_C3HHeJ_T0031244	-	1245	-	MGP_C3HHeJ_P0031244	379 (aa)	-	-
MGP_C3HHeJ_T0031245	-	1252	-	-	- (aa)	-	-
MGP_C3HHeJ_T0031242	-	1726	-	MGP_C3HHeJ_P0031242	478 (aa)	-	-
MGP_C3HHeJ_T0031243	-	1653	-	MGP_C3HHeJ_P0031243	431 (aa)	-	-
MGP_C3HHeJ_T0031240	-	1354	-	-	- (aa)	-	-
MGP_C3HHeJ_T0031241	-	759	-	MGP_C3HHeJ_P0031241	232 (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0018660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0018660's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0018660	Sept4	94	60.751	MGP_C3HHeJ_G0034178	Sept7	70	59.091
MGP_C3HHeJ_G0018660	Sept4	93	43.878	MGP_C3HHeJ_G0017014	Sept10	67	43.878
MGP_C3HHeJ_G0018660	Sept4	93	43.878	MGP_C3HHeJ_G0018049	Sept8	66	43.878
MGP_C3HHeJ_G0018660	Sept4	93	43.878	MGP_C3HHeJ_G0029457	Sept11	67	43.878
MGP_C3HHeJ_G0018660	Sept4	99	64.516	MGP_C3HHeJ_G0032724	Sept1	100	66.897
MGP_C3HHeJ_G0018660	Sept4	92	43.256	MGP_C3HHeJ_G0022213	Sept12	84	42.446
MGP_C3HHeJ_G0018660	Sept4	97	66.230	MGP_C3HHeJ_G0016109	Sept2	100	65.421
MGP_C3HHeJ_G0018660	Sept4	95	83.108	MGP_C3HHeJ_G0022349	Sept5	97	76.359
MGP_C3HHeJ_G0018660	Sept4	92	50.467	MGP_C3HHeJ_G0019195	Sept9	81	52.551
MGP_C3HHeJ_G0018660	Sept4	93	43.390	MGP_C3HHeJ_G0035316	Sept6	67	43.390
MGP_C3HHeJ_G0018660	Sept4	92	51.903	MGP_C3HHeJ_G0021877	Sept3	92	49.682