EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0018679 (Gene tree)
Gene ID: -
Gene Symbol: Msi2
Alias: 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h|Musashi2|msi2h
Full Name: musashi RNA-binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 399835 bases
Position: chr11:89216774-89616608
Accession: 1923876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0031325	RRM_1	PF00076.22	6.3e-34	1	2
MGP_C3HHeJ_P0031325	RRM_1	PF00076.22	6.3e-34	2	2
MGP_C3HHeJ_P0031326	RRM_1	PF00076.22	6.5e-34	1	2
MGP_C3HHeJ_P0031326	RRM_1	PF00076.22	6.5e-34	2	2
MGP_C3HHeJ_P0031329	RRM_1	PF00076.22	3.9e-22	1	1
MGP_C3HHeJ_P0031330	RRM_1	PF00076.22	3.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0031329	-	405	-	MGP_C3HHeJ_P0031329	113 (aa)	-	-
MGP_C3HHeJ_T0031328	-	2538	-	-	- (aa)	-	-
MGP_C3HHeJ_T0031325	-	5924	XM_006534432	MGP_C3HHeJ_P0031325	328 (aa)	XP_006534495	Q920Q6
MGP_C3HHeJ_T0031327	-	1749	-	-	- (aa)	-	-
MGP_C3HHeJ_T0031326	-	1857	-	MGP_C3HHeJ_P0031326	346 (aa)	-	-
MGP_C3HHeJ_T0031330	-	665	-	MGP_C3HHeJ_P0031330	157 (aa)	-	-
MGP_C3HHeJ_T0031331	-	626	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0018679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0018679's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0018679	Msi2	50	33.333	MGP_C3HHeJ_G0015805	Boll	65	32.857
MGP_C3HHeJ_G0018679	Msi2	61	42.857	MGP_C3HHeJ_G0035420	Rbmx	88	45.205
MGP_C3HHeJ_G0018679	Msi2	82	48.421	MGP_C3HHeJ_G0025588	Hnrnpa3	50	39.175
MGP_C3HHeJ_G0018679	Msi2	100	53.982	MGP_C3HHeJ_G0029479	Hnrnpd	100	72.000
MGP_C3HHeJ_G0018679	Msi2	61	41.429	MGP_C3HHeJ_G0017249	Cirbp	88	43.243
MGP_C3HHeJ_G0018679	Msi2	100	52.212	MGP_C3HHeJ_G0018020	Hnrnpab	70	48.039
MGP_C3HHeJ_G0018679	Msi2	100	54.867	MGP_C3HHeJ_G0029481	Hnrnpdl	78	41.634
MGP_C3HHeJ_G0018679	Msi2	65	38.356	MGP_C3HHeJ_G0033491	-	54	40.789
MGP_C3HHeJ_G0018679	Msi2	100	90.323	MGP_C3HHeJ_G0029664	Msi1	99	75.665
MGP_C3HHeJ_G0018679	Msi2	61	42.857	MGP_C3HHeJ_G0035223	Rbm3	63	51.852
MGP_C3HHeJ_G0018679	Msi2	84	30.208	MGP_C3HHeJ_G0028272	Elavl4	78	30.088
MGP_C3HHeJ_G0018679	Msi2	99	41.228	MGP_C3HHeJ_G0020376	Hnrnpa0	59	41.989
MGP_C3HHeJ_G0018679	Msi2	100	44.348	MGP_C3HHeJ_G0030429	Hnrnpa2b1	56	48.193
MGP_C3HHeJ_G0018679	Msi2	60	33.824	MGP_C3HHeJ_G0019731	Slirp	70	33.824
MGP_C3HHeJ_G0018679	Msi2	70	31.250	MGP_C3HHeJ_G0028138	Elavl2	72	32.632
MGP_C3HHeJ_G0018679	Msi2	100	35.398	MGP_C3HHeJ_G0028831	Tardbp	84	31.818
MGP_C3HHeJ_G0018679	Msi2	80	34.074	MGP_C3HHeJ_G0026670	Rbm38	70	38.095
MGP_C3HHeJ_G0018679	Msi2	99	42.400	MGP_C3HHeJ_G0017255	Dazap1	92	49.462