EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0019064 (Gene tree)
Gene ID: -
Gene Symbol: Ddx5
Alias: 2600009A06Rik|G17P1|HUMP68|Hlr1|p68
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 9239 bases
Position: chr11:108850399-108859637
Accession: 105037
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0032834	P68HR	PF08061.11	1.4e-49	1	3
MGP_C3HHeJ_P0032834	P68HR	PF08061.11	1.4e-49	2	3
MGP_C3HHeJ_P0032834	P68HR	PF08061.11	1.4e-49	3	3
MGP_C3HHeJ_P0032834	DEAD	PF00270.29	3.9e-47	1	1
MGP_C3HHeJ_P0032840	DEAD	PF00270.29	1.5e-15	1	1
MGP_C3HHeJ_P0032841	DEAD	PF00270.29	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0032841	-	831	-	MGP_C3HHeJ_P0032841	167 (aa)	-	-
MGP_C3HHeJ_T0032840	-	861	-	MGP_C3HHeJ_P0032840	182 (aa)	-	-
MGP_C3HHeJ_T0032834	-	3829	XM_006532135	MGP_C3HHeJ_P0032834	705 (aa)	XP_006532198	B1ARB9
MGP_C3HHeJ_T0032835	-	3350	-	MGP_C3HHeJ_P0032835	406 (aa)	-	-
MGP_C3HHeJ_T0032836	-	777	-	MGP_C3HHeJ_P0032836	71 (aa)	-	-
MGP_C3HHeJ_T0032837	-	496	-	-	- (aa)	-	-
MGP_C3HHeJ_T0032838	-	708	-	-	- (aa)	-	-
MGP_C3HHeJ_T0032839	-	810	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0019064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0019064's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0019064	Ddx5	73	31.148	MGP_C3HHeJ_G0034217	Ddx25	73	32.514
MGP_C3HHeJ_G0019064	Ddx5	93	83.598	MGP_C3HHeJ_G0021815	Ddx17	97	83.182
MGP_C3HHeJ_G0019064	Ddx5	86	32.857	MGP_C3HHeJ_G0016310	Ddx59	62	34.190
MGP_C3HHeJ_G0019064	Ddx5	74	31.373	MGP_C3HHeJ_G0016181	Ddx18	50	32.836
MGP_C3HHeJ_G0019064	Ddx5	72	33.110	MGP_C3HHeJ_G0019227	Eif4a3	79	35.294
MGP_C3HHeJ_G0019064	Ddx5	71	37.457	MGP_C3HHeJ_G0031116	Ddx47	79	37.651
MGP_C3HHeJ_G0019064	Ddx5	80	42.522	MGP_C3HHeJ_G0035258	Ddx3x	57	43.603
MGP_C3HHeJ_G0019064	Ddx5	76	34.062	MGP_C3HHeJ_G0033388	Ddx49	97	35.311
MGP_C3HHeJ_G0019064	Ddx5	78	32.110	MGP_C3HHeJ_G0022409	Eif4a2	92	33.714
MGP_C3HHeJ_G0019064	Ddx5	88	43.137	MGP_C3HHeJ_G0019049	Ddx42	60	42.373
MGP_C3HHeJ_G0019064	Ddx5	62	35.345	MGP_C3HHeJ_G0018617	Ddx52	64	31.714
MGP_C3HHeJ_G0019064	Ddx5	89	45.040	MGP_C3HHeJ_G0034749	Ddx43	68	45.301
MGP_C3HHeJ_G0019064	Ddx5	81	38.235	MGP_C3HHeJ_G0020351	Ddx41	60	39.683
MGP_C3HHeJ_G0019064	Ddx5	80	42.522	MGP_C3HHeJ_G0016682	D1Pas1	74	43.342
MGP_C3HHeJ_G0019064	Ddx5	80	38.922	MGP_C3HHeJ_G0020677	Ddx4	52	40.214
MGP_C3HHeJ_G0019064	Ddx5	71	30.861	MGP_C3HHeJ_G0025267	Ddx31	52	31.989