EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C3HHeJ_G0019219 (Gene tree)
Gene ID
-
Gene Symbol
Rbfox3
Alias
D11Bwg0517e|Fox-3|Hrnbp3|NeuN|Neuna60
Full Name
RNA binding protein%2C fox-1 homolog (C. elegans) 3
Gene Type
protein_coding
Species
Mus_musculus_c3hhej
Status
putative
Strand
Minus strand
Length
431189 bases
Position
chr11:121243515-121674703
Accession
106368
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C3HHeJ_P0033605Fox-1_CPF12414.82.3e-4511
MGP_C3HHeJ_P0033608Fox-1_CPF12414.82.3e-4511
MGP_C3HHeJ_P0033609Fox-1_CPF12414.82.3e-4511
MGP_C3HHeJ_P0033606Fox-1_CPF12414.82.4e-4111
MGP_C3HHeJ_P0033607Fox-1_CPF12414.82.5e-4111
MGP_C3HHeJ_P0033604Fox-1_CPF12414.82.9e-4111
MGP_C3HHeJ_P0033610Fox-1_CPF12414.81.6e-2111
MGP_C3HHeJ_P0033611RRM_1PF00076.223.1e-1911
MGP_C3HHeJ_P0033605RRM_1PF00076.221.5e-1811
MGP_C3HHeJ_P0033608RRM_1PF00076.221.5e-1811
MGP_C3HHeJ_P0033609RRM_1PF00076.221.6e-1811
MGP_C3HHeJ_P0033604RRM_1PF00076.221.9e-1811
MGP_C3HHeJ_P0033607RRM_1PF00076.222.1e-1811
MGP_C3HHeJ_P0033610RRM_1PF00076.221.9e-1411
MGP_C3HHeJ_P0033606RRM_1PF00076.220.000311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C3HHeJ_T0033608-1542-MGP_C3HHeJ_P0033608313 (aa)--
MGP_C3HHeJ_T0033609-2150-MGP_C3HHeJ_P0033609327 (aa)--
MGP_C3HHeJ_T0033604-3084XM_006533722MGP_C3HHeJ_P0033604360 (aa)XP_006533785Q8BIF2
MGP_C3HHeJ_T0033605-2809-MGP_C3HHeJ_P0033605313 (aa)--
MGP_C3HHeJ_T0033606-1553-MGP_C3HHeJ_P0033606329 (aa)--
MGP_C3HHeJ_T0033607-3140-MGP_C3HHeJ_P0033607374 (aa)--
MGP_C3HHeJ_T0033613-369--- (aa)--
MGP_C3HHeJ_T0033612-301--- (aa)--
MGP_C3HHeJ_T0033611-900-MGP_C3HHeJ_P0033611169 (aa)--
MGP_C3HHeJ_T0033610-710-MGP_C3HHeJ_P0033610145 (aa)--
Gene Model
Click here to download MGP_C3HHeJ_G0019219's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0019219's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C3HHeJ_G0019219Rbfox310071.930MGP_C3HHeJ_G0022224Rbfox18970.000
MGP_C3HHeJ_G0019219Rbfox37231.429MGP_C3HHeJ_G0015805Boll5043.939
MGP_C3HHeJ_G0019219Rbfox39961.932MGP_C3HHeJ_G0021760Rbfox29161.972
MGP_C3HHeJ_G0019219Rbfox36739.130MGP_C3HHeJ_G0028436Pabpc47736.709
MGP_C3HHeJ_G0019219Rbfox35331.868MGP_C3HHeJ_G0032780Tial18131.111

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